PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
FexcContig51830258120.1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
FexcContig51830258120.2 Terpenoid TPS medium pass TPS__00127__sp_J7LJN5_TPS6_PHYDL
FexcContig51830258120.3 Terpenoid TPS medium pass TPS__00127__sp_J7LJN5_TPS6_PHYDL
FexcContig51830258120.4 Terpenoid TPS medium pass TPS__00127__sp_J7LJN5_TPS6_PHYDL
FexcContig51840258140.1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
FexcContig51840258140.2 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
FexcContig51840258140.3 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
FexcContig53850266280.1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
FexcContig56750278340.1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
FexcContig56750278340.2 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
FexcContig56800278560.1 Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
FexcContig56800278570.1 Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
FexcContig568520278740.1 Terpenoid TPS medium pass TPS__00127__sp_J7LJN5_TPS6_PHYDL
FexcContig574200280810.1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
FexcContig59210288110.1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
FexcContig60750294310.1 Terpenoid TPS medium pass TPS__00035__sp_A0A2K9RFZ8_TPS3_VITAC
FexcContig60750294320.1 Terpenoid TPS medium pass TPS__00030__sp_A0A1X9IRQ7_CPS1_ISORU
FexcContig60750294330.1 Terpenoid TPS medium pass TPS__00031__sp_A0A1X9ISH5_KSL3_ISORU
FexcContig6250298960.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
FexcContig67760313230.1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
FexcContig68610315800.1 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
FexcContig7120322680.1 Terpenoid TPS low borderline TPS__00062__sp_B9T536_TPS10_RICCO
FexcContig71610323570.1 Terpenoid TPS medium pass TPS__00037__sp_A0A2K9RG07_TPS5_VITAC
FexcContig71610323570.2 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
FexcContig790060341660.1 Terpenoid TPS medium pass TPS__00042__sp_A0A348AUV9_TPS1E_CAMHI
FexcContig8030344640.1 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
FexcContig8030344640.2 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
FexcContig8030344640.3 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
FexcContig8030344650.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
FexcContig8030344650.2 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
FexcContig80970346620.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
FexcContig80970346620.2 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
FexcContig80970346620.3 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
FexcContig80970346620.4 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
FexcContig827520350960.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
FexcContig89720368210.1 Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
FexcContig98210385670.1 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC