PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
FexcContig19610085490.1 Flavonoid UFGT medium pass
FexcContig20000088960.1 Flavonoid UFGT medium pass
FexcContig20200090770.1 Flavonoid UFGT high pass
FexcContig20200090770.2 Flavonoid UFGT high pass
FexcContig2040092370.1 Flavonoid UFGT high pass
FexcContig2040092370.2 Flavonoid UFGT high pass
FexcContig20810095380.1 Flavonoid UFGT medium pass
FexcContig210096640.1 Flavonoid UFGT medium pass
FexcContig21020096860.1 Flavonoid UFGT medium pass
FexcContig2130098770.1 Flavonoid UFGT medium pass
FexcContig21360099230.1 Flavonoid UFGT medium pass
FexcContig2190103420.1 Flavonoid UFGT high pass
FexcContig2200104180.1 Flavonoid UFGT medium pass
FexcContig22360106530.1 Flavonoid UFGT medium pass
FexcContig22450107110.1 Flavonoid UFGT high pass
FexcContig23270113050.1 Flavonoid UFGT high pass
FexcContig23270113050.2 Flavonoid UFGT medium pass
FexcContig23360113850.1 Flavonoid UFGT high pass
FexcContig23650115620.1 Flavonoid UFGT high pass
FexcContig2370115940.1 Flavonoid UFGT medium pass
FexcContig23860116850.1 Flavonoid UFGT medium pass
FexcContig24360120380.1 Flavonoid UFGT medium pass
FexcContig2540128240.1 Flavonoid UFGT medium pass
FexcContig2540128250.1 Flavonoid UFGT medium pass
FexcContig2540128260.1 Flavonoid UFGT medium pass
FexcContig254200128520.1 Flavonoid UFGT high pass
FexcContig25500129130.1 Flavonoid UFGT medium pass
FexcContig265070135650.1 Flavonoid UFGT high pass
FexcContig27440141220.1 Flavonoid UFGT medium pass
FexcContig28300147560.1 Flavonoid UFGT low borderline
FexcContig3040160560.1 Flavonoid UFGT medium pass
FexcContig30460160780.1 Flavonoid UFGT high pass
FexcContig3100163100.1 Flavonoid UFGT medium pass
FexcContig31400165380.1 Flavonoid UFGT high pass
FexcContig336010177560.1 Flavonoid UFGT high pass
FexcContig33890178940.1 Flavonoid UFGT high pass
FexcContig33970179260.1 Flavonoid UFGT medium pass
FexcContig3440182280.1 Flavonoid UFGT medium pass
FexcContig35360187580.1 Flavonoid UFGT high pass
FexcContig35370187670.1 Flavonoid UFGT medium pass
FexcContig35800189810.1 Flavonoid UFGT medium pass
FexcContig36850195530.1 Flavonoid UFGT low borderline
FexcContig37590198880.1 Flavonoid UFGT medium pass
FexcContig37590198940.1 Flavonoid UFGT high pass
FexcContig37930200520.1 Flavonoid UFGT high pass
FexcContig37930200530.1 Flavonoid UFGT medium pass
FexcContig38030201130.1 Flavonoid UFGT medium pass
FexcContig38460203660.1 Flavonoid UFGT low borderline
FexcContig38540203950.3 Flavonoid UFGT low borderline
FexcContig40580213680.1 Flavonoid UFGT high pass