PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
Reset
Gene Pathway Family Confidence Status
FexcContig41880220120.1 Flavonoid UFGT low borderline
FexcContig42830223560.1 Flavonoid UFGT high pass
FexcContig42830223570.1 Flavonoid UFGT low borderline
FexcContig44330229340.1 Flavonoid UFGT high pass
FexcContig44330229350.1 Flavonoid UFGT high pass
FexcContig44490230010.1 Flavonoid UFGT medium pass
FexcContig4500232090.1 Flavonoid UFGT medium pass
FexcContig45400234110.1 Flavonoid UFGT low borderline
FexcContig45650234880.1 Flavonoid UFGT medium pass
FexcContig45990236120.1 Flavonoid UFGT medium pass
FexcContig464820237930.1 Flavonoid UFGT high pass
FexcContig48510245770.1 Flavonoid UFGT medium pass
FexcContig48630246260.1 Flavonoid UFGT high pass
FexcContig4900247710.1 Flavonoid UFGT medium pass
FexcContig490247480.1 Flavonoid UFGT medium pass
FexcContig49700250260.1 Flavonoid UFGT medium pass
FexcContig49940251280.1 Flavonoid UFGT medium pass
FexcContig5010251980.1 Flavonoid UFGT high pass
FexcContig5010252120.1 Flavonoid UFGT medium pass
FexcContig5010252120.2 Flavonoid UFGT medium pass
FexcContig5010252130.1 Flavonoid UFGT medium pass
FexcContig5030252820.1 Flavonoid UFGT high pass
FexcContig505670253640.1 Flavonoid UFGT medium pass
FexcContig512970255960.1 Flavonoid UFGT high pass
FexcContig52360260710.1 Flavonoid UFGT high pass
FexcContig53020263550.1 Flavonoid UFGT medium pass
FexcContig53340264330.1 Flavonoid UFGT high pass
FexcContig53900266530.1 Flavonoid UFGT high pass
FexcContig54030267090.1 Flavonoid UFGT medium pass
FexcContig5410267260.1 Flavonoid UFGT medium pass
FexcContig5500271110.1 Flavonoid UFGT medium pass
FexcContig5500271120.1 Flavonoid UFGT medium pass
FexcContig56450277260.1 Flavonoid UFGT high pass
FexcContig5690278820.1 Flavonoid UFGT medium pass
FexcContig5690278840.1 Flavonoid UFGT medium pass
FexcContig5690278840.2 Flavonoid UFGT medium pass
FexcContig58000283490.1 Flavonoid UFGT medium pass
FexcContig590286890.1 Flavonoid UFGT medium pass
FexcContig593920288770.1 Flavonoid UFGT medium pass
FexcContig59480289200.1 Flavonoid UFGT medium pass
FexcContig59620289720.1 Flavonoid UFGT medium pass
FexcContig5970290110.1 Flavonoid UFGT high pass
FexcContig601730292320.1 Flavonoid UFGT high pass
FexcContig6070294090.1 Flavonoid UFGT high pass
FexcContig6100295460.1 Flavonoid UFGT high pass
FexcContig61420296500.1 Flavonoid UFGT medium pass
FexcContig619620297650.1 Flavonoid UFGT high pass
FexcContig623040298400.1 Flavonoid UFGT high pass
FexcContig66130309200.1 Flavonoid UFGT high pass
FexcContig6660310310.1 Flavonoid UFGT high pass