PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
FexcContig6750312790.1 Flavonoid UFGT medium pass
FexcContig6780313350.2 Flavonoid UFGT low borderline
FexcContig68040314060.1 Flavonoid UFGT medium pass
FexcContig6820314560.1 Flavonoid UFGT medium pass
FexcContig68600315790.1 Flavonoid UFGT medium pass
FexcContig6940317700.1 Flavonoid UFGT medium pass
FexcContig6940317710.1 Flavonoid UFGT high pass
FexcContig6940317720.1 Flavonoid UFGT medium pass
FexcContig69550318010.1 Flavonoid UFGT high pass
FexcContig697110318190.1 Flavonoid UFGT high pass
FexcContig70180319880.1 Flavonoid UFGT high pass
FexcContig7030320210.1 Flavonoid UFGT high pass
FexcContig70940322030.1 Flavonoid UFGT medium pass
FexcContig71900324320.1 Flavonoid UFGT high pass
FexcContig74160329600.1 Flavonoid UFGT medium pass
FexcContig74660330510.1 Flavonoid UFGT high pass
FexcContig760333660.1 Flavonoid UFGT high pass
FexcContig770336570.1 Flavonoid UFGT high pass
FexcContig772770337620.1 Flavonoid UFGT medium pass
FexcContig782650339720.1 Flavonoid UFGT medium pass
FexcContig788380340870.1 Flavonoid UFGT high pass
FexcContig788380340870.2 Flavonoid UFGT medium pass
FexcContig78990341270.1 Flavonoid UFGT high pass
FexcContig790341350.1 Flavonoid UFGT medium pass
FexcContig8050345160.1 Flavonoid UFGT low borderline
FexcContig8050345160.2 Flavonoid UFGT low borderline
FexcContig80790345910.1 Flavonoid UFGT high pass
FexcContig822430349880.1 Flavonoid UFGT medium pass
FexcContig83660353040.1 Flavonoid UFGT medium pass
FexcContig857660358220.1 Flavonoid UFGT high pass
FexcContig872310361980.1 Flavonoid UFGT medium pass
FexcContig885120365040.1 Flavonoid UFGT medium pass
FexcContig90090369570.1 Flavonoid UFGT low borderline
FexcContig90090369570.2 Flavonoid UFGT low borderline
FexcContig90090369570.3 Flavonoid UFGT low borderline
FexcContig90610370610.1 Flavonoid UFGT low borderline
FexcContig90700370780.1 Flavonoid UFGT high pass
FexcContig90700370790.1 Flavonoid UFGT high pass
FexcContig91150371460.1 Flavonoid UFGT medium pass
FexcContig91150371470.1 Flavonoid UFGT medium pass
FexcContig91150371470.2 Flavonoid UFGT medium pass
FexcContig91900373020.1 Flavonoid UFGT medium pass
FexcContig9210373410.1 Flavonoid UFGT medium pass
FexcContig9220373780.1 Flavonoid UFGT medium pass
FexcContig9220373780.2 Flavonoid UFGT medium pass
FexcContig9390376860.1 Flavonoid UFGT medium pass
FexcContig9390376870.1 Flavonoid UFGT medium pass
FexcContig9390376880.1 Flavonoid UFGT medium pass
FexcContig94380377790.1 Flavonoid UFGT medium pass
FexcContig9520379410.1 Flavonoid UFGT medium pass