PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig7460330400.1 Flavonoid F3H medium borderline
FexcContig74810330850.1 Flavonoid F3H medium borderline
FexcContig74810330850.2 Flavonoid F3H medium borderline
FexcContig74810330850.3 Flavonoid F3H medium borderline
FexcContig753900331980.1 Flavonoid F3H medium borderline
FexcContig78220339690.1 Flavonoid F3H medium borderline
FexcContig78310339820.1 Flavonoid F3H medium borderline
FexcContig8250350450.1 Flavonoid F3H medium borderline
FexcContig838390353440.1 Flavonoid F3H medium borderline
FexcContig83850353470.1 Flavonoid F3H medium borderline
FexcContig8410354260.1 Flavonoid F3H low borderline
FexcContig8420354380.1 Flavonoid F3H low borderline
FexcContig849880356200.1 Flavonoid F3H medium borderline
FexcContig865830360310.1 Flavonoid F3H medium pass
FexcContig88480364890.1 Flavonoid F3H medium borderline
FexcContig88480364890.2 Flavonoid F3H medium borderline
FexcContig93410376100.1 Flavonoid F3H medium borderline
FexcContig94920378750.1 Flavonoid F3H medium borderline
FexcContig9520379400.1 Flavonoid F3H medium borderline
FexcContig9530379630.1 Flavonoid F3H low borderline
FexcContig12830029860.1 Flavonoid FLS medium borderline
FexcContig780250339390.1 Flavonoid FLS medium borderline
FexcContig10120003060.1 Flavonoid FNS medium borderline
FexcContig104730008340.1 Flavonoid FNS medium borderline
FexcContig104730008340.2 Flavonoid FNS medium borderline
FexcContig105300009480.1 Flavonoid FNS medium borderline
FexcContig10790011650.1 Flavonoid FNS low borderline
FexcContig11000013660.1 Flavonoid FNS medium borderline
FexcContig1140017460.1 Flavonoid FNS medium borderline
FexcContig117820020920.1 Flavonoid FNS medium borderline
FexcContig12650028240.1 Flavonoid FNS medium borderline
FexcContig13220033690.1 Flavonoid FNS low borderline
FexcContig16850063640.1 Flavonoid FNS medium borderline
FexcContig19450084280.1 Flavonoid FNS medium borderline
FexcContig25250126860.1 Flavonoid FNS medium borderline
FexcContig25250126860.2 Flavonoid FNS medium borderline
FexcContig31670166730.1 Flavonoid FNS low borderline
FexcContig34550183140.1 Flavonoid FNS medium borderline
FexcContig41440217980.1 Flavonoid FNS medium borderline
FexcContig4370226910.1 Flavonoid FNS medium borderline
FexcContig50251490.2 Flavonoid FNS medium borderline
FexcContig54190267680.1 Flavonoid FNS medium borderline
FexcContig56550277600.1 Flavonoid FNS medium borderline
FexcContig57430280860.1 Flavonoid FNS low borderline
FexcContig57430280860.2 Flavonoid FNS low borderline
FexcContig60040291980.1 Flavonoid FNS medium borderline
FexcContig6550307670.1 Flavonoid FNS medium borderline
FexcContig6920317280.1 Flavonoid FNS medium borderline
FexcContig70318960.1 Flavonoid FNS medium borderline
FexcContig72620326160.1 Flavonoid FNS medium borderline