PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig37440198190.1 Rosmarinic Acid RAS medium pass
FexcContig38610204430.1 Rosmarinic Acid RAS low borderline
FexcContig4110215970.1 Rosmarinic Acid RAS low borderline
FexcContig4300224730.1 Rosmarinic Acid RAS low borderline
FexcContig46270237220.1 Rosmarinic Acid RAS medium pass
FexcContig48830246860.1 Rosmarinic Acid RAS low borderline
FexcContig48830246860.2 Rosmarinic Acid RAS low borderline
FexcContig56370277050.1 Rosmarinic Acid RAS low borderline
FexcContig588690286260.1 Rosmarinic Acid RAS medium pass
FexcContig6080294540.1 Rosmarinic Acid RAS low borderline
FexcContig6340301870.1 Rosmarinic Acid RAS low borderline
FexcContig6340301870.2 Rosmarinic Acid RAS low borderline
FexcContig70090319620.1 Rosmarinic Acid RAS low borderline
FexcContig724250325580.1 Rosmarinic Acid RAS low borderline
FexcContig724250325580.2 Rosmarinic Acid RAS low borderline
FexcContig800690344160.1 Rosmarinic Acid RAS medium pass
FexcContig96000381230.1 Rosmarinic Acid RAS medium pass
FexcContig96000381230.2 Rosmarinic Acid RAS medium pass
FexcContig9670382570.1 Rosmarinic Acid RAS medium pass
FexcContig100990002680.1 Rosmarinic Acid TAT medium pass
FexcContig100990002690.1 Rosmarinic Acid TAT medium pass
FexcContig1170020040.1 Rosmarinic Acid TAT medium pass
FexcContig17110065860.1 Rosmarinic Acid TAT low borderline
FexcContig17110065860.2 Rosmarinic Acid TAT low borderline
FexcContig18340075580.1 Rosmarinic Acid TAT medium pass
FexcContig2290109970.1 Rosmarinic Acid TAT low borderline
FexcContig24660122810.1 Rosmarinic Acid TAT low borderline
FexcContig26600136210.1 Rosmarinic Acid TAT medium pass
FexcContig26880137730.1 Rosmarinic Acid TAT low borderline
FexcContig30610161510.1 Rosmarinic Acid TAT medium pass
FexcContig30610161510.2 Rosmarinic Acid TAT medium pass
FexcContig32160170140.1 Rosmarinic Acid TAT low borderline
FexcContig33270176150.1 Rosmarinic Acid TAT low borderline
FexcContig341950180840.1 Rosmarinic Acid TAT medium pass
FexcContig34970185210.1 Rosmarinic Acid TAT medium pass
FexcContig35120185940.1 Rosmarinic Acid TAT medium pass
FexcContig35360187570.1 Rosmarinic Acid TAT low borderline
FexcContig3550188260.1 Rosmarinic Acid TAT medium pass
FexcContig37630199200.1 Rosmarinic Acid TAT medium pass
FexcContig37630199200.2 Rosmarinic Acid TAT medium pass
FexcContig37630199200.3 Rosmarinic Acid TAT medium pass
FexcContig39830210060.1 Rosmarinic Acid TAT low borderline
FexcContig41570218720.1 Rosmarinic Acid TAT medium pass
FexcContig42840223600.1 Rosmarinic Acid TAT low borderline
FexcContig470240050.1 Rosmarinic Acid TAT low borderline
FexcContig49240248520.3 Rosmarinic Acid TAT low borderline
FexcContig49760250490.1 Rosmarinic Acid TAT medium pass
FexcContig5540272660.1 Rosmarinic Acid TAT low borderline
FexcContig5730280470.1 Rosmarinic Acid TAT medium pass
FexcContig5970290120.1 Rosmarinic Acid TAT medium pass