PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig76130334110.1 Alkaloid G8O/G8H medium borderline
FexcContig779300339090.1 Alkaloid G8O/G8H medium borderline
FexcContig808150345980.1 Alkaloid G8O/G8H medium borderline
FexcContig90690370690.1 Alkaloid G8O/G8H medium borderline
FexcContig92830374940.1 Alkaloid G8O/G8H medium borderline
FexcContig9700383300.2 Alkaloid G8O/G8H low borderline
FexcContig97270383590.1 Alkaloid G8O/G8H medium borderline
FexcContig00000420.1 Alkaloid GES medium pass
FexcContig10420007790.1 Alkaloid GES medium pass
FexcContig10570009880.1 Alkaloid GES low borderline
FexcContig11400017560.1 Alkaloid GES medium pass
FexcContig12420026590.1 Alkaloid GES low borderline
FexcContig12440026670.1 Alkaloid GES medium pass
FexcContig14020041580.1 Alkaloid GES medium pass
FexcContig14470045200.1 Alkaloid GES medium pass
FexcContig15110050300.1 Alkaloid GES low borderline
FexcContig15110050300.2 Alkaloid GES medium pass
FexcContig15110050300.3 Alkaloid GES medium pass
FexcContig15110050300.4 Alkaloid GES medium pass
FexcContig17690069980.1 Alkaloid GES medium pass
FexcContig191100082050.1 Alkaloid GES medium pass
FexcContig200088720.1 Alkaloid GES medium pass
FexcContig2020090740.1 Alkaloid GES low borderline
FexcContig227180108810.1 Alkaloid GES medium pass
FexcContig25450128620.1 Alkaloid GES medium pass
FexcContig28130146260.1 Alkaloid GES medium pass
FexcContig2950155160.1 Alkaloid GES medium pass
FexcContig2950155170.1 Alkaloid GES medium pass
FexcContig2950155170.2 Alkaloid GES medium pass
FexcContig2950155170.3 Alkaloid GES medium pass
FexcContig30470160820.1 Alkaloid GES medium pass
FexcContig30530161200.1 Alkaloid GES medium pass
FexcContig32240170630.1 Alkaloid GES low borderline
FexcContig32860174070.1 Alkaloid GES low borderline
FexcContig3300174840.1 Alkaloid GES medium pass
FexcContig3300174850.1 Alkaloid GES medium pass
FexcContig3300174860.1 Alkaloid GES medium pass
FexcContig3360177390.1 Alkaloid GES medium pass
FexcContig33640177660.1 Alkaloid GES medium pass
FexcContig34660183730.1 Alkaloid GES medium pass
FexcContig34660183740.1 Alkaloid GES low borderline
FexcContig34660183750.1 Alkaloid GES medium pass
FexcContig351440186100.1 Alkaloid GES medium pass
FexcContig37210197380.1 Alkaloid GES medium pass
FexcContig37210197380.2 Alkaloid GES low borderline
FexcContig39860210120.1 Alkaloid GES medium pass
FexcContig39930210600.1 Alkaloid GES medium pass
FexcContig40180211810.1 Alkaloid GES medium pass
FexcContig43320225940.1 Alkaloid GES medium pass
FexcContig44140228570.1 Alkaloid GES medium pass