PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
FexcContig5050253540.1 Alkaloid GES medium pass
FexcContig51830258120.1 Alkaloid GES medium pass
FexcContig51830258120.2 Alkaloid GES medium pass
FexcContig51830258120.3 Alkaloid GES medium pass
FexcContig51830258120.4 Alkaloid GES medium pass
FexcContig51840258140.1 Alkaloid GES medium pass
FexcContig51840258140.2 Alkaloid GES medium pass
FexcContig51840258140.3 Alkaloid GES medium pass
FexcContig53850266280.1 Alkaloid GES medium pass
FexcContig56750278340.1 Alkaloid GES medium pass
FexcContig56750278340.2 Alkaloid GES medium pass
FexcContig56800278560.1 Alkaloid GES medium pass
FexcContig56800278570.1 Alkaloid GES medium pass
FexcContig568520278740.1 Alkaloid GES medium pass
FexcContig574200280810.1 Alkaloid GES medium pass
FexcContig59210288110.1 Alkaloid GES medium pass
FexcContig60750294330.1 Alkaloid GES medium pass
FexcContig6250298960.1 Alkaloid GES medium pass
FexcContig67760313230.1 Alkaloid GES medium pass
FexcContig68610315800.1 Alkaloid GES medium pass
FexcContig7120322680.1 Alkaloid GES low borderline
FexcContig71610323570.1 Alkaloid GES low borderline
FexcContig71610323570.2 Alkaloid GES medium pass
FexcContig790060341660.1 Alkaloid GES medium pass
FexcContig8030344640.1 Alkaloid GES medium pass
FexcContig8030344640.2 Alkaloid GES medium pass
FexcContig8030344640.3 Alkaloid GES medium pass
FexcContig8030344650.1 Alkaloid GES medium pass
FexcContig8030344650.2 Alkaloid GES medium pass
FexcContig80970346620.1 Alkaloid GES medium pass
FexcContig80970346620.2 Alkaloid GES medium pass
FexcContig80970346620.3 Alkaloid GES medium pass
FexcContig80970346620.4 Alkaloid GES medium pass
FexcContig89720368210.1 Alkaloid GES medium pass
FexcContig98210385670.1 Alkaloid GES medium pass
FexcContig100001050.1 Alkaloid GS low borderline
FexcContig102990005670.1 Alkaloid GS high pass
FexcContig1030005880.1 Alkaloid GS medium pass
FexcContig11380017270.1 Alkaloid GS high pass
FexcContig12320025610.1 Alkaloid GS low borderline
FexcContig12560027620.1 Alkaloid GS low borderline
FexcContig12560027620.2 Alkaloid GS low borderline
FexcContig1330034510.1 Alkaloid GS medium pass
FexcContig1330034510.2 Alkaloid GS medium pass
FexcContig16030057240.1 Alkaloid GS high pass
FexcContig16030057240.2 Alkaloid GS high pass
FexcContig18380075750.1 Alkaloid GS low borderline
FexcContig19640085840.1 Alkaloid GS low borderline
FexcContig19640085850.1 Alkaloid GS low borderline
FexcContig201570090020.1 Alkaloid GS low borderline