PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
FexcContig38070201390.1 Flavonoid IFR low borderline
FexcContig38070201390.2 Flavonoid IFR low borderline
FexcContig40960215000.1 Flavonoid IFR high pass
FexcContig40970215040.1 Flavonoid IFR low borderline
FexcContig4150218300.1 Flavonoid IFR low borderline
FexcContig4210221190.1 Flavonoid IFR low borderline
FexcContig4380227230.1 Flavonoid IFR high pass
FexcContig47690242590.1 Flavonoid IFR low borderline
FexcContig51940258350.1 Flavonoid IFR low borderline
FexcContig51940258350.2 Flavonoid IFR low borderline
FexcContig56810278630.1 Flavonoid IFR low borderline
FexcContig581370283830.1 Flavonoid IFR medium pass
FexcContig58220283990.1 Flavonoid IFR low borderline
FexcContig66370309660.1 Flavonoid IFR high pass
FexcContig67030311680.1 Flavonoid IFR low borderline
FexcContig71900324300.1 Flavonoid IFR low borderline
FexcContig71900324300.2 Flavonoid IFR low borderline
FexcContig8330352320.1 Flavonoid IFR low borderline
FexcContig840353910.1 Flavonoid IFR high pass
FexcContig840353910.2 Flavonoid IFR high pass
FexcContig84540355230.1 Flavonoid IFR high pass
FexcContig8830364650.1 Flavonoid IFR low borderline
FexcContig8830364650.2 Flavonoid IFR low borderline
FexcContig8830364650.3 Flavonoid IFR low borderline
FexcContig8830364650.4 Flavonoid IFR low borderline
FexcContig93830376690.1 Flavonoid IFR low borderline
FexcContig9530379700.1 Flavonoid IFR low borderline
FexcContig9530379700.2 Flavonoid IFR low borderline
FexcContig1000001290.1 Flavonoid IFS medium borderline
FexcContig1000001290.2 Flavonoid IFS medium borderline
FexcContig100350001650.1 Flavonoid IFS low borderline
FexcContig102050004420.1 Flavonoid IFS medium borderline
FexcContig10370006760.1 Flavonoid IFS medium borderline
FexcContig10370006770.1 Flavonoid IFS medium borderline
FexcContig104290007840.1 Flavonoid IFS low borderline
FexcContig104310008000.1 Flavonoid IFS medium borderline
FexcContig10570009870.1 Flavonoid IFS medium borderline
FexcContig10590009970.1 Flavonoid IFS medium borderline
FexcContig11230015820.1 Flavonoid IFS low borderline
FexcContig117600020780.1 Flavonoid IFS low borderline
FexcContig11820021240.1 Flavonoid IFS low borderline
FexcContig12070023540.1 Flavonoid IFS low borderline
FexcContig12070023540.2 Flavonoid IFS low borderline
FexcContig12190024440.1 Flavonoid IFS low borderline
FexcContig12190024440.2 Flavonoid IFS low borderline
FexcContig124190026540.1 Flavonoid IFS medium borderline
FexcContig12420026570.1 Flavonoid IFS medium borderline
FexcContig12750028850.1 Flavonoid IFS low borderline
FexcContig13330034790.1 Flavonoid IFS low borderline
FexcContig13330034810.1 Flavonoid IFS medium borderline