PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig24000118120.1 Phenylpropanoid CCR medium borderline
FexcContig244100120970.1 Phenylpropanoid CCR medium borderline
FexcContig24420121010.1 Phenylpropanoid CCR medium borderline
FexcContig24910124490.1 Phenylpropanoid CCR medium pass
FexcContig24910124490.2 Phenylpropanoid CCR medium pass
FexcContig24910124490.3 Phenylpropanoid CCR medium pass
FexcContig326270172700.1 Phenylpropanoid CCR medium borderline
FexcContig32820173850.1 Phenylpropanoid CCR medium pass
FexcContig32820173860.1 Phenylpropanoid CCR medium pass
FexcContig33120175440.1 Phenylpropanoid CCR medium borderline
FexcContig41710219250.1 Phenylpropanoid CCR medium borderline
FexcContig4810244330.1 Phenylpropanoid CCR low borderline
FexcContig49800250790.1 Phenylpropanoid CCR low borderline
FexcContig54630269320.1 Phenylpropanoid CCR low borderline
FexcContig54630269320.2 Phenylpropanoid CCR low borderline
FexcContig5940288820.1 Phenylpropanoid CCR medium borderline
FexcContig5940288820.2 Phenylpropanoid CCR medium borderline
FexcContig692450317390.1 Phenylpropanoid CCR medium borderline
FexcContig741020329470.1 Phenylpropanoid CCR medium pass
FexcContig759610333470.1 Phenylpropanoid CCR medium pass
FexcContig86500360250.1 Phenylpropanoid CCR medium pass
FexcContig868220361030.1 Phenylpropanoid CCR medium borderline
FexcContig868220361030.2 Phenylpropanoid CCR medium borderline
FexcContig98380385870.1 Phenylpropanoid CCR medium pass
FexcContig24320120170.1 Phenylpropanoid CCoAOMT medium pass
FexcContig35370187650.1 Phenylpropanoid CCoAOMT medium pass
FexcContig35370187660.1 Phenylpropanoid CCoAOMT medium pass
FexcContig37300197770.1 Phenylpropanoid CCoAOMT medium pass
FexcContig5320263980.1 Phenylpropanoid CCoAOMT medium pass
FexcContig540266820.1 Phenylpropanoid CCoAOMT low borderline
FexcContig715530323450.1 Phenylpropanoid CCoAOMT low borderline
FexcContig8340352520.1 Phenylpropanoid CCoAOMT medium pass
FexcContig856280358030.1 Phenylpropanoid CCoAOMT medium pass
FexcContig8800363800.1 Phenylpropanoid CCoAOMT medium pass
FexcContig10260005090.1 Phenylpropanoid COMT medium pass
FexcContig11430017720.1 Phenylpropanoid COMT medium pass
FexcContig11600019190.1 Phenylpropanoid COMT low borderline
FexcContig11600019190.2 Phenylpropanoid COMT low borderline
FexcContig11680019680.1 Phenylpropanoid COMT low borderline
FexcContig18740078610.1 Phenylpropanoid COMT medium pass
FexcContig19190082570.1 Phenylpropanoid COMT medium pass
FexcContig19220083040.1 Phenylpropanoid COMT medium pass
FexcContig23350113790.1 Phenylpropanoid COMT medium pass
FexcContig2360115280.1 Phenylpropanoid COMT medium pass
FexcContig236980115910.1 Phenylpropanoid COMT medium pass
FexcContig23940117530.1 Phenylpropanoid COMT medium pass
FexcContig23940117540.1 Phenylpropanoid COMT low borderline
FexcContig23940117550.1 Phenylpropanoid COMT medium pass
FexcContig2660136190.1 Phenylpropanoid COMT medium pass
FexcContig31190164220.1 Phenylpropanoid COMT medium pass