PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig00000350.1 Steroid SQS/FDFT1 medium pass
FexcContig00000360.1 Steroid SQS/FDFT1 high pass
FexcContig00000360.2 Steroid SQS/FDFT1 high pass
FexcContig00000370.1 Steroid SQS/FDFT1 high pass
FexcContig13830039740.1 Steroid SQS/FDFT1 low borderline
FexcContig13830039740.2 Steroid SQS/FDFT1 low borderline
FexcContig23880116990.1 Steroid SQS/FDFT1 high pass
FexcContig242660119650.1 Steroid SQS/FDFT1 low borderline
FexcContig29100152870.1 Steroid SQS/FDFT1 high pass
FexcContig29100152870.2 Steroid SQS/FDFT1 high pass
FexcContig31820167600.1 Steroid SQS/FDFT1 medium pass
FexcContig4240221960.1 Steroid SQS/FDFT1 high pass
FexcContig42450222250.1 Steroid SQS/FDFT1 low borderline
FexcContig57540281310.1 Steroid SQS/FDFT1 medium pass
FexcContig7690336140.1 Steroid SQS/FDFT1 low borderline
FexcContig84960356160.1 Steroid SQS/FDFT1 medium pass