PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
FexcContig4800244050.1 Alkaloid IO medium borderline
FexcContig4800244060.1 Alkaloid IO medium borderline
FexcContig49640249870.1 Alkaloid IO medium borderline
FexcContig60440293180.1 Alkaloid IO medium borderline
FexcContig636810302770.1 Alkaloid IO medium borderline
FexcContig66570310170.1 Alkaloid IO low borderline
FexcContig71610323640.1 Alkaloid IO medium borderline
FexcContig750540331370.1 Alkaloid IO low borderline
FexcContig760333540.1 Alkaloid IO medium borderline
FexcContig760333540.2 Alkaloid IO medium borderline
FexcContig7940342020.1 Alkaloid IO medium borderline
FexcContig818240348430.1 Alkaloid IO medium pass
FexcContig818240348440.1 Alkaloid IO high pass
FexcContig83210352100.1 Alkaloid IO medium borderline
FexcContig83330352430.1 Alkaloid IO medium borderline
FexcContig8360352950.1 Alkaloid IO low borderline
FexcContig8540357590.1 Alkaloid IO medium borderline
FexcContig900369340.1 Alkaloid IO low borderline
FexcContig90690370700.1 Alkaloid IO medium borderline
FexcContig94020377180.1 Alkaloid IO low borderline
FexcContig111990015290.1 Alkaloid ISY medium pass
FexcContig17160066200.1 Alkaloid ISY high pass
FexcContig2050093330.1 Alkaloid ISY low borderline
FexcContig30440160700.1 Alkaloid ISY high pass
FexcContig30440160700.2 Alkaloid ISY high pass
FexcContig32530172320.1 Alkaloid ISY medium pass
FexcContig5450268770.1 Alkaloid ISY low borderline
FexcContig59370288730.1 Alkaloid ISY medium pass
FexcContig59370288730.2 Alkaloid ISY medium pass
FexcContig630300380.1 Alkaloid ISY high pass
FexcContig960380980.1 Alkaloid ISY medium pass
FexcContig18030072930.1 Alkaloid LAMT medium borderline
FexcContig19030081480.1 Alkaloid LAMT medium pass
FexcContig2120097990.1 Alkaloid LAMT medium borderline
FexcContig21490100090.1 Alkaloid LAMT medium borderline
FexcContig2350114750.1 Alkaloid LAMT low borderline
FexcContig2590132300.1 Alkaloid LAMT low borderline
FexcContig2730140110.1 Alkaloid LAMT medium borderline
FexcContig2730140120.1 Alkaloid LAMT medium pass
FexcContig2860149070.1 Alkaloid LAMT medium borderline
FexcContig28630149400.1 Alkaloid LAMT medium pass
FexcContig5260261890.1 Alkaloid LAMT medium pass
FexcContig5260261890.2 Alkaloid LAMT medium pass
FexcContig1370038600.1 Alkaloid MPO high pass
FexcContig15940056460.1 Alkaloid MPO medium pass
FexcContig2230105990.1 Alkaloid MPO medium pass
FexcContig23300113390.1 Alkaloid MPO low borderline
FexcContig23300113410.1 Alkaloid MPO high pass
FexcContig26930137880.1 Alkaloid MPO medium pass
FexcContig28460148530.1 Alkaloid MPO low borderline