PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
FexcContig5560273670.3 Alkaloid NMT medium pass
FexcContig55750274400.1 Alkaloid NMT medium borderline
FexcContig5600275390.1 Alkaloid NMT medium pass
FexcContig5700279470.1 Alkaloid NMT medium pass
FexcContig5700279480.1 Alkaloid NMT medium pass
FexcContig58040283620.1 Alkaloid NMT medium pass
FexcContig60291430.1 Alkaloid NMT medium borderline
FexcContig618280297420.1 Alkaloid NMT low borderline
FexcContig6290300110.1 Alkaloid NMT medium pass
FexcContig6290300120.1 Alkaloid NMT medium pass
FexcContig634040301960.1 Alkaloid NMT medium pass
FexcContig63780303040.1 Alkaloid NMT medium pass
FexcContig6430304490.1 Alkaloid NMT medium pass
FexcContig6800313940.1 Alkaloid NMT low borderline
FexcContig6800313940.2 Alkaloid NMT low borderline
FexcContig6870315980.1 Alkaloid NMT medium borderline
FexcContig710322140.1 Alkaloid NMT medium pass
FexcContig71940324380.1 Alkaloid NMT medium pass
FexcContig73980328920.1 Alkaloid NMT medium pass
FexcContig7660335400.1 Alkaloid NMT medium pass
FexcContig7660335400.2 Alkaloid NMT medium pass
FexcContig77880338860.1 Alkaloid NMT medium pass
FexcContig804750345110.1 Alkaloid NMT medium borderline
FexcContig812250347320.1 Alkaloid NMT medium pass
FexcContig83090351880.1 Alkaloid NMT medium pass
FexcContig8370353080.1 Alkaloid NMT medium borderline
FexcContig839350353660.1 Alkaloid NMT low borderline
FexcContig85500357880.1 Alkaloid NMT medium pass
FexcContig85500357880.2 Alkaloid NMT medium pass
FexcContig86650360570.1 Alkaloid NMT medium borderline
FexcContig86650360570.2 Alkaloid NMT medium borderline
FexcContig920373060.1 Alkaloid NMT medium pass
FexcContig9210373520.1 Alkaloid NMT medium borderline
FexcContig9320375840.1 Alkaloid NMT low borderline
FexcContig970383180.1 Alkaloid NMT medium pass
FexcContig970383180.2 Alkaloid NMT medium pass
FexcContig970383180.3 Alkaloid NMT medium pass
FexcContig97230383540.1 Alkaloid NMT medium pass
FexcContig97230383540.2 Alkaloid NMT medium pass
FexcContig12740028730.1 Alkaloid PMT medium pass
FexcContig12740028740.1 Alkaloid PMT medium pass
FexcContig12790029160.1 Alkaloid PMT medium pass
FexcContig12790029160.2 Alkaloid PMT medium pass
FexcContig14780047240.1 Alkaloid PMT medium pass
FexcContig147960047320.1 Alkaloid PMT low borderline
FexcContig15540053520.1 Alkaloid PMT medium pass
FexcContig15540053520.2 Alkaloid PMT medium pass
FexcContig17110065860.1 Alkaloid PMT low borderline
FexcContig17110065860.2 Alkaloid PMT low borderline
FexcContig17180066320.1 Alkaloid PMT medium pass