PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig21260098260.1 Terpenoid UGT medium pass
FexcContig2130098770.1 Terpenoid UGT medium pass
FexcContig21360099230.1 Terpenoid UGT medium pass
FexcContig2190103420.1 Terpenoid UGT medium pass
FexcContig2200104180.1 Terpenoid UGT low borderline
FexcContig22360106530.1 Terpenoid UGT medium pass
FexcContig22450107110.1 Terpenoid UGT medium pass
FexcContig23270113050.1 Terpenoid UGT medium pass
FexcContig23270113050.2 Terpenoid UGT medium pass
FexcContig23360113850.1 Terpenoid UGT medium pass
FexcContig23650115620.1 Terpenoid UGT medium pass
FexcContig2370115940.1 Terpenoid UGT medium pass
FexcContig23860116850.1 Terpenoid UGT medium pass
FexcContig24360120380.1 Terpenoid UGT medium pass
FexcContig2540128240.1 Terpenoid UGT medium pass
FexcContig2540128250.1 Terpenoid UGT medium pass
FexcContig2540128260.1 Terpenoid UGT medium pass
FexcContig254200128520.1 Terpenoid UGT medium pass
FexcContig25500129130.1 Terpenoid UGT medium pass
FexcContig265060135640.1 Terpenoid UGT medium pass
FexcContig265070135650.1 Terpenoid UGT medium pass
FexcContig27440141220.1 Terpenoid UGT medium pass
FexcContig28300147560.1 Terpenoid UGT low borderline
FexcContig289060151560.1 Terpenoid UGT medium pass
FexcContig289060151560.2 Terpenoid UGT medium pass
FexcContig289060151560.3 Terpenoid UGT medium pass
FexcContig289060151560.4 Terpenoid UGT medium pass
FexcContig3040160560.1 Terpenoid UGT medium pass
FexcContig30460160780.1 Terpenoid UGT medium pass
FexcContig3100163100.1 Terpenoid UGT medium pass
FexcContig31400165380.1 Terpenoid UGT medium pass
FexcContig32820173800.1 Terpenoid UGT low borderline
FexcContig32820173800.2 Terpenoid UGT low borderline
FexcContig32820173800.3 Terpenoid UGT low borderline
FexcContig336010177560.1 Terpenoid UGT medium pass
FexcContig33890178940.1 Terpenoid UGT medium pass
FexcContig33970179260.1 Terpenoid UGT medium pass
FexcContig3440182280.1 Terpenoid UGT medium pass
FexcContig346050183590.1 Terpenoid UGT medium pass
FexcContig35360187580.1 Terpenoid UGT medium pass
FexcContig35370187670.1 Terpenoid UGT medium pass
FexcContig35550188670.1 Terpenoid UGT medium pass
FexcContig35800189810.1 Terpenoid UGT low borderline
FexcContig36850195530.1 Terpenoid UGT medium pass
FexcContig37590198880.1 Terpenoid UGT medium pass
FexcContig37590198940.1 Terpenoid UGT medium pass
FexcContig37930200520.1 Terpenoid UGT medium pass
FexcContig37930200530.1 Terpenoid UGT medium pass
FexcContig38030201130.1 Terpenoid UGT medium pass
FexcContig38460203660.1 Terpenoid UGT medium pass