PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
FexcContig173380067550.1 Alkaloid PMT medium borderline
FexcContig23300113420.1 Alkaloid PMT medium pass
FexcContig27360140630.1 Alkaloid PMT medium pass
FexcContig27360140630.2 Alkaloid PMT medium pass
FexcContig274010141060.1 Alkaloid PMT medium borderline
FexcContig274010141060.2 Alkaloid PMT medium borderline
FexcContig27800143930.1 Alkaloid PMT low borderline
FexcContig29320154190.1 Alkaloid PMT low borderline
FexcContig2960155630.1 Alkaloid PMT medium pass
FexcContig35250186750.1 Alkaloid PMT medium borderline
FexcContig35250186750.2 Alkaloid PMT medium borderline
FexcContig35250186750.3 Alkaloid PMT medium borderline
FexcContig35250186750.4 Alkaloid PMT medium borderline
FexcContig35270186900.1 Alkaloid PMT medium borderline
FexcContig35270186900.2 Alkaloid PMT medium borderline
FexcContig36540193690.1 Alkaloid PMT medium pass
FexcContig38150201920.1 Alkaloid PMT low borderline
FexcContig38610204430.1 Alkaloid PMT low borderline
FexcContig38610204430.2 Alkaloid PMT low borderline
FexcContig4570235170.1 Alkaloid PMT medium pass
FexcContig46270237220.1 Alkaloid PMT low borderline
FexcContig5210259580.1 Alkaloid PMT low borderline
FexcContig55470273010.1 Alkaloid PMT medium pass
FexcContig56370277050.1 Alkaloid PMT medium pass
FexcContig6780313410.1 Alkaloid PMT low borderline
FexcContig73510328010.1 Alkaloid PMT medium borderline
FexcContig73510328010.2 Alkaloid PMT medium borderline
FexcContig73510328010.3 Alkaloid PMT medium borderline
FexcContig800343820.1 Alkaloid PMT medium borderline
FexcContig95300379830.1 Alkaloid PMT low borderline
FexcContig96000381230.1 Alkaloid PMT medium pass
FexcContig96000381230.2 Alkaloid PMT low borderline
FexcContig10200004310.1 Alkaloid PYKS low borderline
FexcContig11210015530.1 Alkaloid PYKS high pass
FexcContig11850021370.1 Alkaloid PYKS low borderline
FexcContig1200022800.1 Alkaloid PYKS low borderline
FexcContig13470036070.1 Alkaloid PYKS high pass
FexcContig13470036070.2 Alkaloid PYKS high pass
FexcContig137780039150.1 Alkaloid PYKS low borderline
FexcContig1430043660.1 Alkaloid PYKS low borderline
FexcContig16760062940.1 Alkaloid PYKS low borderline
FexcContig18620077770.1 Alkaloid PYKS low borderline
FexcContig19150082380.1 Alkaloid PYKS low borderline
FexcContig19690086100.1 Alkaloid PYKS low borderline
FexcContig19710086350.1 Alkaloid PYKS low borderline
FexcContig20480093180.1 Alkaloid PYKS low borderline
FexcContig21900103520.1 Alkaloid PYKS high pass
FexcContig26690136640.1 Alkaloid PYKS low borderline
FexcContig27970144900.1 Alkaloid PYKS low borderline
FexcContig29170153300.1 Alkaloid PYKS low borderline