PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig52750262430.1 Steroid CYP90D1 low borderline
FexcContig57170279920.1 Steroid CYP90D1 low borderline
FexcContig60280292720.1 Steroid CYP90D1 low borderline
FexcContig6310300770.1 Steroid CYP90D1 low borderline
FexcContig636810302770.1 Steroid CYP90D1 low borderline
FexcContig66570310170.1 Steroid CYP90D1 low borderline
FexcContig67120311850.1 Steroid CYP90D1 low borderline
FexcContig70318890.1 Steroid CYP90D1 low borderline
FexcContig7050320980.1 Steroid CYP90D1 medium borderline
FexcContig7200324730.1 Steroid CYP90D1 low borderline
FexcContig7600333740.1 Steroid CYP90D1 low borderline
FexcContig76630335570.1 Steroid CYP90D1 low borderline
FexcContig7850340160.1 Steroid CYP90D1 medium borderline
FexcContig7860340390.1 Steroid CYP90D1 low borderline
FexcContig7940342020.1 Steroid CYP90D1 low borderline
FexcContig811840347240.1 Steroid CYP90D1 low borderline
FexcContig830570351810.1 Steroid CYP90D1 medium borderline
FexcContig8340352630.1 Steroid CYP90D1 low borderline
FexcContig8940367630.1 Steroid CYP90D1 low borderline
FexcContig9030369880.1 Steroid CYP90D1 medium borderline
FexcContig910371200.1 Steroid CYP90D1 low borderline
FexcContig91330371650.1 Steroid CYP90D1 medium borderline
FexcContig92120373660.1 Steroid CYP90D1 low borderline
FexcContig92120373660.2 Steroid CYP90D1 low borderline
FexcContig9800385220.1 Steroid CYP90D1 medium borderline
FexcContig17670069870.1 Steroid DET2 low borderline
FexcContig42190221340.1 Steroid DET2 medium pass
FexcContig55850274650.1 Steroid DET2 low borderline
FexcContig55850274650.2 Steroid DET2 low borderline
FexcContig57040279640.1 Steroid DET2 low borderline
FexcContig57040279640.2 Steroid DET2 medium pass
FexcContig7600333820.1 Steroid DET2 medium pass
FexcContig41020215550.1 Steroid DWF1 low borderline
FexcContig877270362980.1 Steroid DWF1 medium pass
FexcContig877270362980.2 Steroid DWF1 medium pass
FexcContig877270362980.3 Steroid DWF1 medium pass
FexcContig9730383660.1 Steroid DWF1 low borderline
FexcContig10120003060.1 Steroid DWF4/CYP90B1 low borderline
FexcContig10370006770.1 Steroid DWF4/CYP90B1 low borderline
FexcContig104310008000.1 Steroid DWF4/CYP90B1 low borderline
FexcContig10570009870.1 Steroid DWF4/CYP90B1 low borderline
FexcContig11000013660.1 Steroid DWF4/CYP90B1 low borderline
FexcContig1140017460.1 Steroid DWF4/CYP90B1 low borderline
FexcContig1150018180.1 Steroid DWF4/CYP90B1 low borderline
FexcContig12070023540.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig12070023540.2 Steroid DWF4/CYP90B1 medium borderline
FexcContig12190024440.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig12190024440.2 Steroid DWF4/CYP90B1 medium borderline
FexcContig12420026570.1 Steroid DWF4/CYP90B1 low borderline
FexcContig12420026580.1 Steroid DWF4/CYP90B1 low borderline