PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
FexcContig2530127290.2 Rosmarinic Acid 4CL medium pass
FexcContig25540129360.1 Rosmarinic Acid 4CL low borderline
FexcContig25540129360.2 Rosmarinic Acid 4CL low borderline
FexcContig26950138210.1 Rosmarinic Acid 4CL medium pass
FexcContig27500141750.1 Rosmarinic Acid 4CL medium pass
FexcContig28020145420.1 Rosmarinic Acid 4CL medium pass
FexcContig28840151170.1 Rosmarinic Acid 4CL medium pass
FexcContig2900152140.1 Rosmarinic Acid 4CL low borderline
FexcContig29520155420.1 Rosmarinic Acid 4CL low borderline
FexcContig29520155420.2 Rosmarinic Acid 4CL low borderline
FexcContig30860162570.1 Rosmarinic Acid 4CL low borderline
FexcContig32140170000.1 Rosmarinic Acid 4CL low borderline
FexcContig33990179310.1 Rosmarinic Acid 4CL low borderline
FexcContig3520186300.1 Rosmarinic Acid 4CL low borderline
FexcContig35740189460.1 Rosmarinic Acid 4CL low borderline
FexcContig35740189460.2 Rosmarinic Acid 4CL low borderline
FexcContig35740189460.3 Rosmarinic Acid 4CL low borderline
FexcContig40190211890.1 Rosmarinic Acid 4CL low borderline
FexcContig4420228790.1 Rosmarinic Acid 4CL medium pass
FexcContig49530249760.1 Rosmarinic Acid 4CL medium pass
FexcContig53480264700.3 Rosmarinic Acid 4CL low borderline
FexcContig540266700.1 Rosmarinic Acid 4CL medium pass
FexcContig540266700.2 Rosmarinic Acid 4CL medium pass
FexcContig55320272430.1 Rosmarinic Acid 4CL medium pass
FexcContig5630276680.1 Rosmarinic Acid 4CL low borderline
FexcContig5630276680.2 Rosmarinic Acid 4CL low borderline
FexcContig57900282860.1 Rosmarinic Acid 4CL medium pass
FexcContig57900282860.2 Rosmarinic Acid 4CL medium pass
FexcContig5960289580.1 Rosmarinic Acid 4CL medium pass
FexcContig68020314010.1 Rosmarinic Acid 4CL medium pass
FexcContig68020314020.1 Rosmarinic Acid 4CL medium pass
FexcContig69300317510.1 Rosmarinic Acid 4CL medium pass
FexcContig7090321890.1 Rosmarinic Acid 4CL medium pass
FexcContig7090321890.2 Rosmarinic Acid 4CL medium pass
FexcContig7090321890.3 Rosmarinic Acid 4CL medium pass
FexcContig7230325360.1 Rosmarinic Acid 4CL medium pass
FexcContig7230325370.1 Rosmarinic Acid 4CL medium pass
FexcContig7710336940.1 Rosmarinic Acid 4CL low borderline
FexcContig800180344080.1 Rosmarinic Acid 4CL medium pass
FexcContig82200349730.1 Rosmarinic Acid 4CL low borderline
FexcContig8500356530.1 Rosmarinic Acid 4CL medium pass
FexcContig8500356530.2 Rosmarinic Acid 4CL medium pass
FexcContig870361220.1 Rosmarinic Acid 4CL low borderline
FexcContig89020366660.1 Rosmarinic Acid 4CL medium pass
FexcContig1000001290.1 Rosmarinic Acid C4H medium pass
FexcContig1000001290.2 Rosmarinic Acid C4H medium pass
FexcContig10120003060.1 Rosmarinic Acid C4H low borderline
FexcContig10160003680.1 Rosmarinic Acid C4H medium pass
FexcContig10160003690.1 Rosmarinic Acid C4H medium pass
FexcContig102050004420.1 Rosmarinic Acid C4H medium pass