PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
FexcContig58790285990.1 Rosmarinic Acid C4H medium pass
FexcContig58880286290.1 Rosmarinic Acid C4H low borderline
FexcContig58880286300.1 Rosmarinic Acid C4H low borderline
FexcContig59020287180.1 Rosmarinic Acid C4H low borderline
FexcContig59410288970.1 Rosmarinic Acid C4H low borderline
FexcContig59410288970.2 Rosmarinic Acid C4H low borderline
FexcContig59540289410.1 Rosmarinic Acid C4H medium pass
FexcContig59660289810.1 Rosmarinic Acid C4H low borderline
FexcContig59660289810.2 Rosmarinic Acid C4H low borderline
FexcContig59660289820.1 Rosmarinic Acid C4H low borderline
FexcContig60040291980.1 Rosmarinic Acid C4H low borderline
FexcContig60280292720.1 Rosmarinic Acid C4H low borderline
FexcContig60291510.1 Rosmarinic Acid C4H medium pass
FexcContig60291520.1 Rosmarinic Acid C4H medium pass
FexcContig60291530.1 Rosmarinic Acid C4H medium pass
FexcContig60440293180.1 Rosmarinic Acid C4H low borderline
FexcContig60440293180.2 Rosmarinic Acid C4H low borderline
FexcContig62450298830.1 Rosmarinic Acid C4H low borderline
FexcContig6270299480.1 Rosmarinic Acid C4H low borderline
FexcContig6310300770.1 Rosmarinic Acid C4H medium pass
FexcContig6350302250.1 Rosmarinic Acid C4H low borderline
FexcContig636810302770.1 Rosmarinic Acid C4H low borderline
FexcContig65110306750.1 Rosmarinic Acid C4H low borderline
FexcContig6550307670.1 Rosmarinic Acid C4H low borderline
FexcContig65680308120.1 Rosmarinic Acid C4H medium pass
FexcContig65990308720.1 Rosmarinic Acid C4H low borderline
FexcContig663820309700.1 Rosmarinic Acid C4H low borderline
FexcContig66480309960.1 Rosmarinic Acid C4H low borderline
FexcContig67120311850.1 Rosmarinic Acid C4H medium pass
FexcContig68500315410.1 Rosmarinic Acid C4H low borderline
FexcContig689200316670.1 Rosmarinic Acid C4H low borderline
FexcContig6920317280.1 Rosmarinic Acid C4H low borderline
FexcContig700980319680.1 Rosmarinic Acid C4H low borderline
FexcContig70318890.1 Rosmarinic Acid C4H medium pass
FexcContig70318960.1 Rosmarinic Acid C4H low borderline
FexcContig70318960.2 Rosmarinic Acid C4H low borderline
FexcContig7100322190.1 Rosmarinic Acid C4H low borderline
FexcContig71610323640.1 Rosmarinic Acid C4H low borderline
FexcContig71940324390.1 Rosmarinic Acid C4H medium pass
FexcContig7200324730.1 Rosmarinic Acid C4H medium pass
FexcContig72030324800.1 Rosmarinic Acid C4H low borderline
FexcContig72800326610.1 Rosmarinic Acid C4H low borderline
FexcContig73470327910.1 Rosmarinic Acid C4H low borderline
FexcContig740328950.1 Rosmarinic Acid C4H medium pass
FexcContig740328960.1 Rosmarinic Acid C4H medium pass
FexcContig740328970.1 Rosmarinic Acid C4H medium pass
FexcContig740329040.1 Rosmarinic Acid C4H low borderline
FexcContig7560332530.1 Rosmarinic Acid C4H medium pass
FexcContig7600333740.1 Rosmarinic Acid C4H low borderline
FexcContig76020333930.1 Rosmarinic Acid C4H low borderline