PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
FexcContig12830029860.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig13100032400.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig1330034340.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig1330034440.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig14290043620.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig15150050520.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig15550053670.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig1810073440.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig19060081600.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig2020090700.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig2020090700.2 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig21570100630.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig21650101160.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig22600108090.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig22910110000.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig23030111240.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig25820131630.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig26140133680.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig2710139250.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig271100139340.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig27650142680.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig28800150630.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig29150153180.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig29150153180.2 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig29150153180.3 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig3180167400.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig31820167590.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig3190168080.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig3190168080.2 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig3210169540.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig3210169540.2 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig3210169540.3 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig32540172360.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig32890174290.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig35200186480.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig35200186480.2 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig35560188720.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig356820189230.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig35950190280.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig38770205000.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig38770205000.2 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig3970209460.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig3970209470.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig3970209470.2 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO
FexcContig40730214150.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig41390217690.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig41390217690.2 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig4200220810.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig43270225740.1 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO
FexcContig44790231160.2 Alkaloid CODM/T6ODM medium borderline CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO