PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
FexcContig453520233940.1 Steroid CPD/CYP90A1 medium borderline
FexcContig49640249870.1 Steroid CPD/CYP90A1 medium borderline
FexcContig50400253170.1 Steroid CPD/CYP90A1 medium borderline
FexcContig5220260030.1 Steroid CPD/CYP90A1 medium borderline
FexcContig52470261180.1 Steroid CPD/CYP90A1 low borderline
FexcContig52470261180.2 Steroid CPD/CYP90A1 low borderline
FexcContig5340264570.1 Steroid CPD/CYP90A1 low borderline
FexcContig6140296390.1 Steroid CPD/CYP90A1 low borderline
FexcContig61900297530.1 Steroid CPD/CYP90A1 low borderline
FexcContig61900297530.2 Steroid CPD/CYP90A1 low borderline
FexcContig652020306980.1 Steroid CPD/CYP90A1 low borderline
FexcContig700980319680.1 Steroid CPD/CYP90A1 medium borderline
FexcContig73910328770.1 Steroid CPD/CYP90A1 low borderline
FexcContig7640334990.1 Steroid CPD/CYP90A1 low borderline
FexcContig8940367620.1 Steroid CPD/CYP90A1 low borderline
FexcContig900369340.1 Steroid CPD/CYP90A1 medium borderline
FexcContig92480374380.1 Steroid CPD/CYP90A1 low borderline
FexcContig97270383590.1 Steroid CPD/CYP90A1 low borderline
FexcContig2130098880.1 Steroid CPI1 high pass
FexcContig2140099580.1 Steroid CPI1 low borderline
FexcContig9200373350.1 Steroid CPI1 medium pass
FexcContig10160003690.1 Steroid CYP51G1 medium borderline
FexcContig105300009480.1 Steroid CYP51G1 medium borderline
FexcContig124190026540.1 Steroid CYP51G1 medium borderline
FexcContig13720038800.1 Steroid CYP51G1 medium borderline
FexcContig13720038800.2 Steroid CYP51G1 medium borderline
FexcContig16230058760.1 Steroid CYP51G1 medium borderline
FexcContig16230058790.1 Steroid CYP51G1 medium borderline
FexcContig16440060300.1 Steroid CYP51G1 medium borderline
FexcContig20630094160.1 Steroid CYP51G1 medium borderline
FexcContig20970096420.1 Steroid CYP51G1 low borderline
FexcContig20970096420.2 Steroid CYP51G1 low borderline
FexcContig2470123060.1 Steroid CYP51G1 medium borderline
FexcContig2470123070.1 Steroid CYP51G1 medium borderline
FexcContig25250126860.1 Steroid CYP51G1 medium borderline
FexcContig25250126860.2 Steroid CYP51G1 medium borderline
FexcContig300158340.1 Steroid CYP51G1 medium borderline
FexcContig37720199590.1 Steroid CYP51G1 medium borderline
FexcContig37890200270.1 Steroid CYP51G1 medium borderline
FexcContig3930207660.1 Steroid CYP51G1 medium borderline
FexcContig39880210280.1 Steroid CYP51G1 medium borderline
FexcContig40210212040.1 Steroid CYP51G1 medium borderline
FexcContig4800244050.1 Steroid CYP51G1 medium borderline
FexcContig4800244060.1 Steroid CYP51G1 medium borderline
FexcContig50900254630.1 Steroid CYP51G1 medium borderline
FexcContig51180255650.1 Steroid CYP51G1 medium borderline
FexcContig54190267680.1 Steroid CYP51G1 medium borderline
FexcContig58790285990.1 Steroid CYP51G1 medium borderline
FexcContig65990308720.1 Steroid CYP51G1 medium borderline
FexcContig689200316670.1 Steroid CYP51G1 medium borderline