PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig59660289820.1 Phenylpropanoid C4H/CYP73A medium borderline
FexcContig7100322190.1 Phenylpropanoid C4H/CYP73A low borderline
FexcContig772160337500.1 Phenylpropanoid C4H/CYP73A low borderline
FexcContig779300339090.1 Phenylpropanoid C4H/CYP73A low borderline
FexcContig90690370690.1 Phenylpropanoid C4H/CYP73A low borderline
FexcContig100001050.1 Phenylpropanoid CAD low borderline
FexcContig102990005670.1 Phenylpropanoid CAD medium pass
FexcContig1030005880.1 Phenylpropanoid CAD low borderline
FexcContig10420007790.1 Phenylpropanoid CAD low borderline
FexcContig11140014810.1 Phenylpropanoid CAD low borderline
FexcContig11380017270.1 Phenylpropanoid CAD medium pass
FexcContig12420026590.1 Phenylpropanoid CAD low borderline
FexcContig12440026670.1 Phenylpropanoid CAD low borderline
FexcContig124450026770.1 Phenylpropanoid CAD medium borderline
FexcContig124450026770.2 Phenylpropanoid CAD medium borderline
FexcContig12560027620.1 Phenylpropanoid CAD low borderline
FexcContig12560027620.2 Phenylpropanoid CAD low borderline
FexcContig14380044390.1 Phenylpropanoid CAD low borderline
FexcContig14470045200.1 Phenylpropanoid CAD medium pass
FexcContig15110050300.1 Phenylpropanoid CAD low borderline
FexcContig15110050300.2 Phenylpropanoid CAD low borderline
FexcContig15110050300.3 Phenylpropanoid CAD low borderline
FexcContig15110050300.4 Phenylpropanoid CAD low borderline
FexcContig16030057240.1 Phenylpropanoid CAD medium pass
FexcContig16030057240.2 Phenylpropanoid CAD medium pass
FexcContig18330075400.1 Phenylpropanoid CAD medium borderline
FexcContig18330075400.2 Phenylpropanoid CAD medium borderline
FexcContig18330075410.1 Phenylpropanoid CAD medium borderline
FexcContig18380075750.1 Phenylpropanoid CAD low borderline
FexcContig19450084290.1 Phenylpropanoid CAD low borderline
FexcContig19640085840.1 Phenylpropanoid CAD low borderline
FexcContig19640085850.1 Phenylpropanoid CAD medium pass
FexcContig200088720.1 Phenylpropanoid CAD low borderline
FexcContig2130098950.1 Phenylpropanoid CAD medium borderline
FexcContig218300102900.1 Phenylpropanoid CAD medium borderline
FexcContig2260107980.1 Phenylpropanoid CAD low borderline
FexcContig24380120490.1 Phenylpropanoid CAD medium pass
FexcContig250124850.1 Phenylpropanoid CAD low borderline
FexcContig250124850.2 Phenylpropanoid CAD low borderline
FexcContig25450128620.1 Phenylpropanoid CAD low borderline
FexcContig25510129180.1 Phenylpropanoid CAD medium borderline
FexcContig25700130610.1 Phenylpropanoid CAD low borderline
FexcContig26660136470.1 Phenylpropanoid CAD medium pass
FexcContig26710136740.1 Phenylpropanoid CAD medium borderline
FexcContig26710136750.1 Phenylpropanoid CAD medium borderline
FexcContig27620142500.1 Phenylpropanoid CAD low borderline
FexcContig2950155170.1 Phenylpropanoid CAD low borderline
FexcContig2950155170.2 Phenylpropanoid CAD low borderline
FexcContig2950155170.3 Phenylpropanoid CAD low borderline
FexcContig30470160820.1 Phenylpropanoid CAD medium pass