PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig97590384010.2 Terpenoid BAHD medium pass
FexcContig98530386060.1 Terpenoid BAHD medium pass
FexcContig990386770.1 Terpenoid BAHD medium pass
FexcContig1210023750.1 Terpenoid CMK/IspE high pass
FexcContig1210023750.2 Terpenoid CMK/IspE high pass
FexcContig13600037450.1 Terpenoid CMK/IspE low borderline
FexcContig13600037450.2 Terpenoid CMK/IspE low borderline
FexcContig10160003680.1 Terpenoid CYP71 medium borderline
FexcContig102050004420.1 Terpenoid CYP71 medium borderline
FexcContig10280005350.1 Terpenoid CYP71 medium borderline
FexcContig104290007840.1 Terpenoid CYP71 low borderline
FexcContig104310008000.1 Terpenoid CYP71 medium borderline
FexcContig10570009870.1 Terpenoid CYP71 medium borderline
FexcContig1150018290.1 Terpenoid CYP71 medium pass
FexcContig11600019180.1 Terpenoid CYP71 low borderline
FexcContig11690019740.1 Terpenoid CYP71 medium pass
FexcContig12420026570.1 Terpenoid CYP71 medium borderline
FexcContig12420026580.1 Terpenoid CYP71 medium borderline
FexcContig12420026580.2 Terpenoid CYP71 medium borderline
FexcContig12650028240.1 Terpenoid CYP71 medium borderline
FexcContig12650028250.1 Terpenoid CYP71 medium borderline
FexcContig12780029060.1 Terpenoid CYP71 medium pass
FexcContig12780029070.1 Terpenoid CYP71 medium pass
FexcContig12780029110.1 Terpenoid CYP71 medium pass
FexcContig12780029110.2 Terpenoid CYP71 medium pass
FexcContig12870030180.1 Terpenoid CYP71 medium pass
FexcContig12870030180.2 Terpenoid CYP71 medium pass
FexcContig12870030180.3 Terpenoid CYP71 medium pass
FexcContig13320034710.1 Terpenoid CYP71 low borderline
FexcContig140180041570.1 Terpenoid CYP71 medium borderline
FexcContig14850047620.1 Terpenoid CYP71 low borderline
FexcContig14880047880.1 Terpenoid CYP71 medium borderline
FexcContig14880047900.1 Terpenoid CYP71 medium borderline
FexcContig14880047910.1 Terpenoid CYP71 medium borderline
FexcContig14880047910.2 Terpenoid CYP71 medium borderline
FexcContig15460052850.1 Terpenoid CYP71 medium pass
FexcContig15460052850.2 Terpenoid CYP71 medium pass
FexcContig16230058760.1 Terpenoid CYP71 medium borderline
FexcContig16230058790.1 Terpenoid CYP71 medium borderline
FexcContig16300059290.1 Terpenoid CYP71 low borderline
FexcContig17330067500.1 Terpenoid CYP71 medium borderline
FexcContig17820071080.1 Terpenoid CYP71 medium pass
FexcContig18290074950.1 Terpenoid CYP71 medium borderline
FexcContig18290074950.2 Terpenoid CYP71 medium borderline
FexcContig18290074950.3 Terpenoid CYP71 medium borderline
FexcContig18290074980.1 Terpenoid CYP71 medium borderline
FexcContig19800086970.1 Terpenoid CYP71 medium borderline
FexcContig20460093000.1 Terpenoid CYP71 low borderline
FexcContig21340099130.1 Terpenoid CYP71 medium borderline
FexcContig247930123800.1 Terpenoid CYP71 medium borderline