PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold2720161180.1 Alkaloid CYP719 medium borderline
Lusiscaffold2860179200.1 Alkaloid CYP719 medium borderline
Lusiscaffold3100204240.1 Alkaloid CYP719 low borderline
Lusiscaffold310200220.1 Alkaloid CYP719 medium borderline
Lusiscaffold3530233600.1 Alkaloid CYP719 medium borderline
Lusiscaffold3590236800.1 Alkaloid CYP719 medium borderline
Lusiscaffold4620283470.1 Alkaloid CYP719 medium borderline
Lusiscaffold4640288190.1 Alkaloid CYP719 medium borderline
Lusiscaffold5240311980.1 Alkaloid CYP719 medium borderline
Lusiscaffold670353770.1 Alkaloid CYP719 medium borderline
Lusiscaffold8630401080.1 Alkaloid CYP719 medium borderline
Lusiscaffold100002870.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold10360007630.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold1140020080.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold20220116350.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold20220116360.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold2910181890.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold3270216090.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold3490230720.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold4610281710.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold6050334730.1 Alkaloid CYP80B1 low borderline
Lusiscaffold7110364640.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold7830382770.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold820390140.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold960426170.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold960426210.1 Alkaloid CYP80B1 medium borderline
Lusiscaffold1510070160.1 Alkaloid CYP80F1 medium borderline
Lusiscaffold3490230760.1 Alkaloid CYP80F1 medium borderline
Lusiscaffold4160261960.1 Alkaloid CYP80F1 medium borderline
LusiC82357050000380.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold1030005920.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold11580023800.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold1270044700.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold1560077570.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold2840178340.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold2910181850.1 Alkaloid G8O/G8H low borderline
Lusiscaffold2910181920.1 Alkaloid G8O/G8H low borderline
Lusiscaffold2910183140.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold3250214120.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold3250214130.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold3460228800.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold3490230670.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold3490230800.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold3760249470.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold420265700.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold4610281630.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold4610281700.1 Alkaloid G8O/G8H low borderline
Lusiscaffold4640289780.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold4680290660.1 Alkaloid G8O/G8H medium borderline
Lusiscaffold4730293980.1 Alkaloid G8O/G8H medium borderline