PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2406
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Lusiscaffold9770428650.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold1070011190.1 Steroid CAS medium pass
Lusiscaffold10980014260.1 Steroid CAS medium pass
Lusiscaffold11340019040.1 Steroid CAS medium pass
Lusiscaffold1210031910.1 Steroid CAS medium pass
Lusiscaffold1210031930.1 Steroid CAS low borderline
Lusiscaffold1230037590.1 Steroid CAS low borderline
Lusiscaffold1230037610.1 Steroid CAS low borderline
Lusiscaffold13080046100.1 Steroid CAS medium pass
Lusiscaffold13080046110.1 Steroid CAS medium pass
Lusiscaffold13130048720.1 Steroid CAS low borderline
Lusiscaffold13310051760.1 Steroid CAS medium pass
Lusiscaffold1380055700.1 Steroid CAS medium pass
Lusiscaffold1380055710.1 Steroid CAS medium pass
Lusiscaffold1450061020.1 Steroid CAS medium pass
Lusiscaffold1450061970.1 Steroid CAS medium pass
Lusiscaffold150068010.1 Steroid CAS medium pass
Lusiscaffold16030085570.1 Steroid CAS medium pass
Lusiscaffold16030085580.1 Steroid CAS medium pass
Lusiscaffold16030085590.1 Steroid CAS medium pass
Lusiscaffold16860092680.1 Steroid CAS low borderline
Lusiscaffold1690093190.1 Steroid CAS medium pass
Lusiscaffold1790101290.1 Steroid CAS medium pass
Lusiscaffold1790101300.1 Steroid CAS medium pass
Lusiscaffold1790101310.1 Steroid CAS medium pass
Lusiscaffold1790101320.1 Steroid CAS medium pass
Lusiscaffold1790101330.1 Steroid CAS medium pass
Lusiscaffold1840103600.1 Steroid CAS medium pass
Lusiscaffold1990112310.1 Steroid CAS medium pass
Lusiscaffold2010115380.1 Steroid CAS medium pass
Lusiscaffold2490141880.1 Steroid CAS medium pass
Lusiscaffold2490141940.1 Steroid CAS low borderline
Lusiscaffold2490141960.1 Steroid CAS medium pass
Lusiscaffold2510147980.1 Steroid CAS low borderline
Lusiscaffold2510148000.1 Steroid CAS medium pass
Lusiscaffold2880179930.1 Steroid CAS low borderline
Lusiscaffold2970189600.1 Steroid CAS medium pass
Lusiscaffold3100203330.1 Steroid CAS low borderline
Lusiscaffold3100203360.1 Steroid CAS low borderline
Lusiscaffold3100203370.1 Steroid CAS medium pass
Lusiscaffold3190211050.1 Steroid CAS medium pass
Lusiscaffold3530234640.1 Steroid CAS low borderline
Lusiscaffold3760248880.1 Steroid CAS medium pass
Lusiscaffold3760248910.1 Steroid CAS low borderline
Lusiscaffold4200267770.1 Steroid CAS medium pass
Lusiscaffold4200267780.1 Steroid CAS medium pass
Lusiscaffold420266900.1 Steroid CAS medium pass
Lusiscaffold430272140.1 Steroid CAS low borderline
Lusiscaffold4880301660.1 Steroid CAS medium pass
Lusiscaffold5470317910.1 Steroid CAS low borderline