PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig70318960.1 Steroid DWF4/CYP90B1 low borderline
FexcContig70318960.2 Steroid DWF4/CYP90B1 low borderline
FexcContig7130322930.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig72030324800.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig73470327910.1 Steroid DWF4/CYP90B1 low borderline
FexcContig740328950.1 Steroid DWF4/CYP90B1 low borderline
FexcContig740329040.1 Steroid DWF4/CYP90B1 low borderline
FexcContig760333540.1 Steroid DWF4/CYP90B1 low borderline
FexcContig760333540.2 Steroid DWF4/CYP90B1 low borderline
FexcContig76130334110.1 Steroid DWF4/CYP90B1 low borderline
FexcContig7940342030.1 Steroid DWF4/CYP90B1 low borderline
FexcContig80080344210.1 Steroid DWF4/CYP90B1 low borderline
FexcContig8210349440.1 Steroid DWF4/CYP90B1 low borderline
FexcContig82360350120.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig83330352430.1 Steroid DWF4/CYP90B1 low borderline
FexcContig8360352950.1 Steroid DWF4/CYP90B1 low borderline
FexcContig85050356890.1 Steroid DWF4/CYP90B1 low borderline
FexcContig8540357590.1 Steroid DWF4/CYP90B1 low borderline
FexcContig8740362180.1 Steroid DWF4/CYP90B1 low borderline
FexcContig881370364250.1 Steroid DWF4/CYP90B1 low borderline
FexcContig88700365680.1 Steroid DWF4/CYP90B1 low borderline
FexcContig8940367640.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig90870371040.1 Steroid DWF4/CYP90B1 low borderline
FexcContig92830374940.1 Steroid DWF4/CYP90B1 low borderline
FexcContig9480378410.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig95590380310.1 Steroid DWF4/CYP90B1 low borderline
FexcContig95900380820.1 Steroid DWF4/CYP90B1 medium borderline
FexcContig9910387310.1 Steroid DWF4/CYP90B1 low borderline
FexcContig9910387320.1 Steroid DWF4/CYP90B1 low borderline
FexcContig15880056230.1 Steroid DWF5 medium borderline
FexcContig2130098560.2 Steroid DWF5 low borderline
FexcContig7980342850.1 Steroid DWF5 medium pass
FexcContig26860137690.1 Steroid DWF7 medium pass
FexcContig29990157750.1 Steroid DWF7 medium pass
FexcContig136850038410.1 Steroid FK medium pass
FexcContig760333510.1 Steroid FK high pass
FexcContig760333510.2 Steroid FK high pass
FexcContig1880079000.1 Steroid HYD1 high pass
FexcContig1880079000.2 Steroid HYD1 high pass
FexcContig266320136310.1 Steroid HYD1 medium pass
FexcContig18290074950.1 Steroid ROT3/CYP90C1 medium borderline
FexcContig26210134100.1 Steroid ROT3/CYP90C1 medium borderline
FexcContig33150175560.1 Steroid ROT3/CYP90C1 low borderline
FexcContig39920210510.1 Steroid ROT3/CYP90C1 medium borderline
FexcContig44770231090.1 Steroid ROT3/CYP90C1 medium borderline
FexcContig68290314780.2 Steroid ROT3/CYP90C1 low borderline
FexcContig76020333930.1 Steroid ROT3/CYP90C1 medium borderline
FexcContig11630019460.1 Steroid SMO1/SMO2 medium pass
FexcContig11630019460.2 Steroid SMO1/SMO2 medium pass
FexcContig12610027960.1 Steroid SMO1/SMO2 low borderline