PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig12610027960.2 Steroid SMO1/SMO2 low borderline
FexcContig18260074780.1 Steroid SMO1/SMO2 medium pass
FexcContig18260074780.2 Steroid SMO1/SMO2 medium pass
FexcContig2230106050.1 Steroid SMO1/SMO2 medium pass
FexcContig41680219130.1 Steroid SMO1/SMO2 medium pass
FexcContig41680219130.2 Steroid SMO1/SMO2 medium pass
FexcContig41680219130.3 Steroid SMO1/SMO2 medium pass
FexcContig53680265560.1 Steroid SMO1/SMO2 medium pass
FexcContig53680265560.2 Steroid SMO1/SMO2 medium pass
FexcContig53680265560.3 Steroid SMO1/SMO2 medium pass
FexcContig570279210.2 Steroid SMO1/SMO2 low borderline
FexcContig570279210.3 Steroid SMO1/SMO2 low borderline
FexcContig570279210.4 Steroid SMO1/SMO2 low borderline
FexcContig86500360240.1 Steroid SMO1/SMO2 medium pass
FexcContig990386750.1 Steroid SMO1/SMO2 medium pass
FexcContig10080002380.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig10080002380.2 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig1190021670.1 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig1210023710.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig1280029340.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig13140032540.1 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig13260034010.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig13600037340.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig13850039830.1 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig14200043060.1 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig14510045530.1 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig15110050140.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig15110050140.2 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig15420052470.1 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig173070067360.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig17440068260.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig18160073890.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig18160073900.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig1830075030.1 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig18630077850.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig18880080040.1 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig19930087850.1 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig200088480.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig200088480.2 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig20050089130.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig20050089140.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig2010089760.1 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig2010089760.2 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig2010089760.3 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig2010089760.4 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig2150100190.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig21830102890.1 Steroid SMT1/SMT2/SMT3 medium pass
FexcContig21830102890.2 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig21960103760.1 Steroid SMT1/SMT2/SMT3 low borderline
FexcContig22560107630.1 Steroid SMT1/SMT2/SMT3 medium pass