PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig27720143270.1 Flavonoid IFS medium borderline
FexcContig27870144200.1 Flavonoid IFS low borderline
FexcContig27870144200.2 Flavonoid IFS low borderline
FexcContig28140146310.1 Flavonoid IFS low borderline
FexcContig28140146340.1 Flavonoid IFS low borderline
FexcContig28140146350.1 Flavonoid IFS low borderline
FexcContig28460148540.1 Flavonoid IFS low borderline
FexcContig2860149080.1 Flavonoid IFS low borderline
FexcContig2860149080.2 Flavonoid IFS low borderline
FexcContig29270153890.1 Flavonoid IFS low borderline
FexcContig30157950.1 Flavonoid IFS low borderline
FexcContig30460160800.1 Flavonoid IFS low borderline
FexcContig31720166970.1 Flavonoid IFS low borderline
FexcContig32140169910.1 Flavonoid IFS low borderline
FexcContig32510172240.1 Flavonoid IFS low borderline
FexcContig32950174540.1 Flavonoid IFS medium borderline
FexcContig33000174920.1 Flavonoid IFS medium borderline
FexcContig343870182200.1 Flavonoid IFS low borderline
FexcContig35080185680.1 Flavonoid IFS low borderline
FexcContig35480188130.1 Flavonoid IFS low borderline
FexcContig367110194560.1 Flavonoid IFS medium borderline
FexcContig37120197140.1 Flavonoid IFS low borderline
FexcContig37360197910.1 Flavonoid IFS medium borderline
FexcContig37720199590.1 Flavonoid IFS medium borderline
FexcContig37790199760.1 Flavonoid IFS medium borderline
FexcContig37890200260.1 Flavonoid IFS medium borderline
FexcContig38330202920.1 Flavonoid IFS low borderline
FexcContig38910205770.1 Flavonoid IFS low borderline
FexcContig38910205770.2 Flavonoid IFS low borderline
FexcContig3910206930.1 Flavonoid IFS low borderline
FexcContig3910206930.2 Flavonoid IFS low borderline
FexcContig3930207660.1 Flavonoid IFS medium borderline
FexcContig39380208020.1 Flavonoid IFS medium borderline
FexcContig39880210280.1 Flavonoid IFS medium borderline
FexcContig39880210300.1 Flavonoid IFS medium borderline
FexcContig39920210510.1 Flavonoid IFS low borderline
FexcContig41020215530.1 Flavonoid IFS low borderline
FexcContig4200220890.1 Flavonoid IFS low borderline
FexcContig42010220910.1 Flavonoid IFS low borderline
FexcContig421560221250.1 Flavonoid IFS low borderline
FexcContig44770231090.1 Flavonoid IFS low borderline
FexcContig44900231630.1 Flavonoid IFS medium borderline
FexcContig452300233420.1 Flavonoid IFS medium borderline
FexcContig453520233940.1 Flavonoid IFS low borderline
FexcContig464860237940.1 Flavonoid IFS low borderline
FexcContig48730246540.1 Flavonoid IFS low borderline
FexcContig49380249120.1 Flavonoid IFS medium borderline
FexcContig49640249870.1 Flavonoid IFS low borderline
FexcContig49950251320.1 Flavonoid IFS low borderline
FexcContig49950251320.2 Flavonoid IFS low borderline