PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
FexcContig50110252220.1 Flavonoid IFS medium borderline
FexcContig50251480.1 Flavonoid IFS low borderline
FexcContig50251480.2 Flavonoid IFS low borderline
FexcContig50251490.1 Flavonoid IFS low borderline
FexcContig5070253930.1 Flavonoid IFS medium borderline
FexcContig50900254630.1 Flavonoid IFS medium borderline
FexcContig5110255350.1 Flavonoid IFS medium borderline
FexcContig51430256450.1 Flavonoid IFS low borderline
FexcContig51430256450.2 Flavonoid IFS low borderline
FexcContig52050259280.1 Flavonoid IFS low borderline
FexcContig5230260360.1 Flavonoid IFS low borderline
FexcContig52410260910.1 Flavonoid IFS low borderline
FexcContig52470261180.1 Flavonoid IFS low borderline
FexcContig52470261180.2 Flavonoid IFS low borderline
FexcContig52750262420.1 Flavonoid IFS medium borderline
FexcContig52750262430.1 Flavonoid IFS medium borderline
FexcContig53210264060.1 Flavonoid IFS low borderline
FexcContig5340264490.1 Flavonoid IFS medium borderline
FexcContig5340264570.1 Flavonoid IFS low borderline
FexcContig54440268650.1 Flavonoid IFS medium borderline
FexcContig550690271440.1 Flavonoid IFS medium borderline
FexcContig550690271440.2 Flavonoid IFS medium borderline
FexcContig55390272570.1 Flavonoid IFS low borderline
FexcContig56150275790.1 Flavonoid IFS low borderline
FexcContig56550277620.1 Flavonoid IFS medium borderline
FexcContig5680278530.1 Flavonoid IFS low borderline
FexcContig57320280560.1 Flavonoid IFS medium borderline
FexcContig58040283630.1 Flavonoid IFS low borderline
FexcContig58770285960.1 Flavonoid IFS medium borderline
FexcContig58790285990.1 Flavonoid IFS medium borderline
FexcContig59020287180.1 Flavonoid IFS low borderline
FexcContig59410288970.1 Flavonoid IFS low borderline
FexcContig59410288970.2 Flavonoid IFS low borderline
FexcContig59540289410.1 Flavonoid IFS medium borderline
FexcContig60291510.1 Flavonoid IFS medium borderline
FexcContig60291520.1 Flavonoid IFS medium borderline
FexcContig60291530.1 Flavonoid IFS medium borderline
FexcContig60440293180.1 Flavonoid IFS medium borderline
FexcContig624150298760.1 Flavonoid IFS low borderline
FexcContig62450298830.1 Flavonoid IFS low borderline
FexcContig6310300770.1 Flavonoid IFS medium borderline
FexcContig636810302770.1 Flavonoid IFS medium borderline
FexcContig65110306750.1 Flavonoid IFS low borderline
FexcContig65680308120.1 Flavonoid IFS medium borderline
FexcContig65990308720.1 Flavonoid IFS medium borderline
FexcContig66480309960.1 Flavonoid IFS low borderline
FexcContig68500315410.1 Flavonoid IFS medium borderline
FexcContig700980319680.1 Flavonoid IFS low borderline
FexcContig70318890.1 Flavonoid IFS medium borderline
FexcContig7050320980.1 Flavonoid IFS low borderline