PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig7130322930.1 Flavonoid IFS low borderline
FexcContig71940324390.1 Flavonoid IFS medium borderline
FexcContig72030324800.1 Flavonoid IFS low borderline
FexcContig73470327910.1 Flavonoid IFS low borderline
FexcContig73910328770.1 Flavonoid IFS low borderline
FexcContig740328950.1 Flavonoid IFS medium borderline
FexcContig740328960.1 Flavonoid IFS medium borderline
FexcContig740328970.1 Flavonoid IFS medium borderline
FexcContig740329040.1 Flavonoid IFS medium borderline
FexcContig7600333740.1 Flavonoid IFS low borderline
FexcContig76020333930.1 Flavonoid IFS low borderline
FexcContig760333540.1 Flavonoid IFS medium borderline
FexcContig760333540.2 Flavonoid IFS medium borderline
FexcContig7640334990.1 Flavonoid IFS low borderline
FexcContig779300339090.1 Flavonoid IFS low borderline
FexcContig7850340160.1 Flavonoid IFS low borderline
FexcContig7940342030.1 Flavonoid IFS medium borderline
FexcContig818240348440.1 Flavonoid IFS medium borderline
FexcContig820348710.1 Flavonoid IFS low borderline
FexcContig8210349440.1 Flavonoid IFS low borderline
FexcContig82360350120.1 Flavonoid IFS low borderline
FexcContig8250350430.1 Flavonoid IFS medium borderline
FexcContig830570351810.1 Flavonoid IFS low borderline
FexcContig83330352430.1 Flavonoid IFS medium borderline
FexcContig8360352950.1 Flavonoid IFS low borderline
FexcContig83960353740.1 Flavonoid IFS medium borderline
FexcContig870361260.1 Flavonoid IFS low borderline
FexcContig8740362180.1 Flavonoid IFS low borderline
FexcContig881370364250.1 Flavonoid IFS low borderline
FexcContig8860365250.1 Flavonoid IFS low borderline
FexcContig886780365530.1 Flavonoid IFS medium borderline
FexcContig88700365680.1 Flavonoid IFS low borderline
FexcContig8940367630.1 Flavonoid IFS medium borderline
FexcContig900369340.1 Flavonoid IFS low borderline
FexcContig9030369880.1 Flavonoid IFS low borderline
FexcContig90690370690.1 Flavonoid IFS low borderline
FexcContig90870371040.1 Flavonoid IFS medium borderline
FexcContig910371200.1 Flavonoid IFS low borderline
FexcContig91330371650.1 Flavonoid IFS low borderline
FexcContig92480374380.1 Flavonoid IFS low borderline
FexcContig94020377180.1 Flavonoid IFS low borderline
FexcContig95590380310.1 Flavonoid IFS low borderline
FexcContig95900380820.1 Flavonoid IFS low borderline
FexcContig97750384320.2 Flavonoid IFS low borderline
FexcContig9800385220.1 Flavonoid IFS low borderline
FexcContig10100002800.1 Flavonoid PAL medium pass
FexcContig12340025680.1 Flavonoid PAL medium pass
FexcContig12340025690.1 Flavonoid PAL medium pass
FexcContig17590069160.1 Flavonoid PAL medium pass
FexcContig200088430.1 Flavonoid PAL high pass