PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig6900316900.1 Phenylpropanoid CSE medium pass
FexcContig700319170.1 Phenylpropanoid CSE medium pass
FexcContig700319180.1 Phenylpropanoid CSE medium pass
FexcContig700319190.1 Phenylpropanoid CSE medium pass
FexcContig700319200.1 Phenylpropanoid CSE medium pass
FexcContig720324510.1 Phenylpropanoid CSE medium pass
FexcContig73230327440.1 Phenylpropanoid CSE medium pass
FexcContig7500331280.1 Phenylpropanoid CSE medium pass
FexcContig830570351800.1 Phenylpropanoid CSE low borderline
FexcContig85310357390.1 Phenylpropanoid CSE medium pass
FexcContig9230373910.1 Phenylpropanoid CSE medium pass
FexcContig10370006770.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig11130014670.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig12650028240.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig12650028250.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig13720038800.2 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig14880047880.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig14880047900.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig18450076400.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig2300110870.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig2480123830.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig25250126860.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig25250126860.2 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig2860149080.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig2860149080.2 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig36760194740.1 Phenylpropanoid F5H/CYP84A low borderline
FexcContig4290224110.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig50251500.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig54190267680.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig5590274850.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig60440293180.2 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig6550307670.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig6920317280.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig7880340820.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig818240348430.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig92120373660.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig92830374940.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig97270383590.1 Phenylpropanoid F5H/CYP84A medium borderline
FexcContig100990002680.1 Phenylpropanoid HCT low borderline
FexcContig100990002690.1 Phenylpropanoid HCT low borderline
FexcContig12680028350.1 Phenylpropanoid HCT low borderline
FexcContig12740028730.1 Phenylpropanoid HCT low borderline
FexcContig12740028740.1 Phenylpropanoid HCT low borderline
FexcContig14260043330.1 Phenylpropanoid HCT low borderline
FexcContig14780047240.1 Phenylpropanoid HCT medium pass
FexcContig147960047320.1 Phenylpropanoid HCT medium pass
FexcContig15540053520.1 Phenylpropanoid HCT medium pass
FexcContig15540053520.2 Phenylpropanoid HCT medium pass
FexcContig22300106070.1 Phenylpropanoid HCT low borderline
FexcContig2290109970.1 Phenylpropanoid HCT low borderline