PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
FexcContig24660122810.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
FexcContig27360140630.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig27360140630.2 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig29320154190.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
FexcContig29370154500.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig32160170140.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
FexcContig35360187570.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig37440198190.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig38150201920.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig38610204430.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig39830210060.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig42840223600.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig46270237220.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig5210259580.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
FexcContig5540272660.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
FexcContig56370277050.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig57810282390.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig57810282390.2 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig60250292490.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig60250292500.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig6860315590.1 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig800690344160.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig9210373510.1 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
FexcContig96000381230.1 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig96000381230.2 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
FexcContig9670382570.1 Phenylpropanoid HCT medium pass HCT__00002__sp_Q9FI78_HST_ARATH
FexcContig104730008320.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig1080011670.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig1210023800.1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig1210023800.2 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig14270043420.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig14270043420.2 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig15990056610.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig16970064360.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig16990064640.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig18620077620.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig18620077630.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig189190080380.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig2430119840.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig24610122520.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig24610122520.2 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig24730123520.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig2580131400.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig27520141930.1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig27530141980.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig29480155080.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig30500161040.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig331770175710.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig3630192220.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig36310192390.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH