PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
FexcContig36690194330.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig38070201360.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig382620202440.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig383470202980.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig38420203470.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig38420203490.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig38750204990.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig392330207450.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig45330233850.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig45450234250.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig47640242220.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig48360245110.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig53970266620.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig53970266620.2 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig54410268600.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig550240271350.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig56560277680.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig56980279080.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig57820282490.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig610390295520.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig61970297700.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig61970297700.2 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig622720298300.1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig678690313480.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig691010317160.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig69800318460.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig750331170.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig7540332110.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig7690336150.1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig800180344060.1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
FexcContig802380344480.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig8120347270.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig8120347280.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig8120347280.2 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig8160347890.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig8160347900.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig8160347910.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig8160347920.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig8160347920.2 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig82090349410.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig83210352110.1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig840353890.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig840353900.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig884960364910.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig9210373500.1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
FexcContig9410377340.2 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
FexcContig9420377540.1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
FexcContig99100387440.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig99100387450.1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
FexcContig10100002800.1 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR