PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig72800326610.1 Terpenoid CYP76 low borderline
FexcContig73470327910.1 Terpenoid CYP76 low borderline
FexcContig740328950.1 Terpenoid CYP76 medium pass
FexcContig740328960.1 Terpenoid CYP76 medium pass
FexcContig740328970.1 Terpenoid CYP76 medium borderline
FexcContig740329040.1 Terpenoid CYP76 medium pass
FexcContig7560332530.1 Terpenoid CYP76 medium pass
FexcContig760333540.1 Terpenoid CYP76 medium borderline
FexcContig760333540.2 Terpenoid CYP76 medium borderline
FexcContig76130334110.1 Terpenoid CYP76 medium pass
FexcContig783900339920.1 Terpenoid CYP76 medium borderline
FexcContig7880340820.1 Terpenoid CYP76 medium borderline
FexcContig7940342020.1 Terpenoid CYP76 medium pass
FexcContig7940342030.1 Terpenoid CYP76 medium borderline
FexcContig808150345980.1 Terpenoid CYP76 medium pass
FexcContig818240348430.1 Terpenoid CYP76 low borderline
FexcContig818240348440.1 Terpenoid CYP76 low borderline
FexcContig8250350430.1 Terpenoid CYP76 medium borderline
FexcContig83210352100.1 Terpenoid CYP76 medium pass
FexcContig83330352430.1 Terpenoid CYP76 medium pass
FexcContig83960353740.1 Terpenoid CYP76 medium borderline
FexcContig85340357450.1 Terpenoid CYP76 medium borderline
FexcContig8540357590.1 Terpenoid CYP76 medium pass
FexcContig860900359110.1 Terpenoid CYP76 low borderline
FexcContig8790363410.1 Terpenoid CYP76 medium pass
FexcContig8790363410.2 Terpenoid CYP76 medium pass
FexcContig886780365530.1 Terpenoid CYP76 medium borderline
FexcContig8940367440.1 Terpenoid CYP76 medium pass
FexcContig8940367630.1 Terpenoid CYP76 medium borderline
FexcContig89550367940.1 Terpenoid CYP76 medium pass
FexcContig90690370700.1 Terpenoid CYP76 medium pass
FexcContig91250371580.1 Terpenoid CYP76 medium borderline
FexcContig91330371650.1 Terpenoid CYP76 low borderline
FexcContig92830374940.1 Terpenoid CYP76 medium pass
FexcContig94020377180.1 Terpenoid CYP76 low borderline
FexcContig97270383590.1 Terpenoid CYP76 medium pass
FexcContig101770003860.1 Terpenoid DXR medium pass
FexcContig1980086820.1 Terpenoid DXR medium pass
FexcContig20260091160.1 Terpenoid DXR high pass
FexcContig20260091160.2 Terpenoid DXR high pass
FexcContig28480148640.1 Terpenoid DXR medium pass
FexcContig32110169770.1 Terpenoid DXR high pass
FexcContig696670318120.1 Terpenoid DXR low borderline
FexcContig696670318120.2 Terpenoid DXR low borderline
FexcContig696670318120.3 Terpenoid DXR low borderline
FexcContig70180319900.1 Terpenoid DXR low borderline
FexcContig172430066820.1 Terpenoid DXS medium pass
FexcContig18310075270.1 Terpenoid DXS medium pass
FexcContig18310075270.2 Terpenoid DXS medium pass
FexcContig18310075270.3 Terpenoid DXS medium pass