PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig19640085880.1 Terpenoid DXS medium pass
FexcContig19640085880.2 Terpenoid DXS medium pass
FexcContig3200168750.1 Terpenoid DXS medium pass
FexcContig46920239800.1 Terpenoid DXS medium pass
FexcContig55130271810.1 Terpenoid DXS medium pass
FexcContig63550302410.1 Terpenoid DXS medium pass
FexcContig6860315710.1 Terpenoid DXS low borderline
FexcContig188950080110.1 Terpenoid FPPS medium pass
FexcContig188950080110.2 Terpenoid FPPS medium pass
FexcContig20690094670.1 Terpenoid FPPS medium pass
FexcContig21380099350.1 Terpenoid FPPS medium pass
FexcContig2550128970.1 Terpenoid FPPS medium pass
FexcContig31810167420.1 Terpenoid FPPS medium pass
FexcContig382580202390.1 Terpenoid FPPS medium pass
FexcContig430224630.1 Terpenoid FPPS medium pass
FexcContig430224640.1 Terpenoid FPPS medium pass
FexcContig470240040.1 Terpenoid FPPS medium borderline
FexcContig55630273880.1 Terpenoid FPPS medium pass
FexcContig870010361420.1 Terpenoid FPPS medium pass
FexcContig900369280.1 Terpenoid FPPS medium borderline
FexcContig9480378470.1 Terpenoid FPPS low borderline
FexcContig9480378470.2 Terpenoid FPPS low borderline
FexcContig99620388080.1 Terpenoid FPPS medium pass
FexcContig99620388080.2 Terpenoid FPPS medium pass
FexcContig99620388080.3 Terpenoid FPPS medium pass
FexcContig12350025790.1 Terpenoid GGPPS medium borderline
FexcContig137780039140.1 Terpenoid GGPPS medium borderline
FexcContig17450068290.1 Terpenoid GGPPS medium borderline
FexcContig18740078600.1 Terpenoid GGPPS medium borderline
FexcContig22030104550.1 Terpenoid GGPPS medium borderline
FexcContig29420154680.1 Terpenoid GGPPS medium borderline
FexcContig29420154680.2 Terpenoid GGPPS medium borderline
FexcContig29420154680.3 Terpenoid GGPPS medium borderline
FexcContig29420154680.4 Terpenoid GGPPS medium borderline
FexcContig29990157590.1 Terpenoid GGPPS medium borderline
FexcContig31190164230.1 Terpenoid GGPPS medium borderline
FexcContig40140211700.1 Terpenoid GGPPS medium borderline
FexcContig40140211700.2 Terpenoid GGPPS medium borderline
FexcContig40180211830.1 Terpenoid GGPPS medium borderline
FexcContig410215310.1 Terpenoid GGPPS medium borderline
FexcContig418570220050.1 Terpenoid GGPPS medium borderline
FexcContig544340268640.1 Terpenoid GGPPS medium borderline
FexcContig69070317110.1 Terpenoid GGPPS medium borderline
FexcContig725110325920.1 Terpenoid GGPPS medium borderline
FexcContig725110325930.1 Terpenoid GGPPS medium borderline
FexcContig89270367130.1 Terpenoid GGPPS low borderline
FexcContig950378830.1 Terpenoid GGPPS medium borderline
FexcContig95140379170.1 Terpenoid GGPPS medium borderline
FexcContig98640386190.1 Terpenoid GGPPS medium borderline
FexcContig9910387280.1 Terpenoid GGPPS medium borderline