PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
FexcContig7090321890.1 Flavonoid 4CL medium pass
FexcContig7090321890.2 Flavonoid 4CL medium pass
FexcContig7090321890.3 Flavonoid 4CL medium pass
FexcContig7230325360.1 Flavonoid 4CL medium pass
FexcContig7230325370.1 Flavonoid 4CL medium pass
FexcContig7710336940.1 Flavonoid 4CL low borderline
FexcContig800180344080.1 Flavonoid 4CL medium pass
FexcContig82200349730.1 Flavonoid 4CL low borderline
FexcContig8500356530.1 Flavonoid 4CL medium pass
FexcContig8500356530.2 Flavonoid 4CL medium pass
FexcContig870361220.1 Flavonoid 4CL low borderline
FexcContig89020366660.1 Flavonoid 4CL medium pass
FexcContig10430007990.1 Flavonoid ANR medium borderline
FexcContig17770070730.1 Flavonoid ANR medium borderline
FexcContig17770070740.1 Flavonoid ANR medium borderline
FexcContig18330075400.1 Flavonoid ANR medium borderline
FexcContig18330075400.2 Flavonoid ANR medium borderline
FexcContig18330075410.1 Flavonoid ANR medium borderline
FexcContig20170090270.1 Flavonoid ANR medium borderline
FexcContig20170090270.2 Flavonoid ANR medium borderline
FexcContig2130098950.1 Flavonoid ANR medium borderline
FexcContig24000118120.1 Flavonoid ANR medium borderline
FexcContig24910124490.1 Flavonoid ANR low borderline
FexcContig24910124490.2 Flavonoid ANR low borderline
FexcContig24910124490.3 Flavonoid ANR low borderline
FexcContig25510129180.1 Flavonoid ANR medium borderline
FexcContig26710136740.1 Flavonoid ANR medium borderline
FexcContig26710136750.1 Flavonoid ANR medium borderline
FexcContig32450171930.1 Flavonoid ANR low borderline
FexcContig32450171930.2 Flavonoid ANR low borderline
FexcContig32450171930.3 Flavonoid ANR low borderline
FexcContig3910206850.1 Flavonoid ANR low borderline
FexcContig49800250790.1 Flavonoid ANR low borderline
FexcContig5940288820.1 Flavonoid ANR medium borderline
FexcContig5940288820.2 Flavonoid ANR medium borderline
FexcContig61650297120.1 Flavonoid ANR medium borderline
FexcContig66470309940.1 Flavonoid ANR medium borderline
FexcContig7110322560.1 Flavonoid ANR medium borderline
FexcContig7110322560.2 Flavonoid ANR medium borderline
FexcContig77470338020.1 Flavonoid ANR medium borderline
FexcContig86260359510.1 Flavonoid ANR medium borderline
FexcContig86500360250.1 Flavonoid ANR medium borderline
FexcContig8660360470.1 Flavonoid ANR low borderline
FexcContig8660360470.2 Flavonoid ANR low borderline
FexcContig8660360470.3 Flavonoid ANR low borderline
FexcContig868220361030.1 Flavonoid ANR low borderline
FexcContig868220361030.2 Flavonoid ANR low borderline
FexcContig92470374340.1 Flavonoid ANR medium borderline
FexcContig98380385870.1 Flavonoid ANR low borderline
FexcContig11530018720.1 Flavonoid ANS/LDOX medium borderline