PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
FexcContig15860056120.1 Flavonoid ANS/LDOX medium borderline
FexcContig1810073440.1 Flavonoid ANS/LDOX medium borderline
FexcContig23030111240.1 Flavonoid ANS/LDOX medium borderline
FexcContig35560188720.1 Flavonoid ANS/LDOX medium borderline
FexcContig38060201260.1 Flavonoid ANS/LDOX medium borderline
FexcContig38060201260.2 Flavonoid ANS/LDOX medium pass
FexcContig40330212600.1 Flavonoid ANS/LDOX medium borderline
FexcContig41390217690.1 Flavonoid ANS/LDOX medium borderline
FexcContig41390217690.2 Flavonoid ANS/LDOX medium borderline
FexcContig48060244200.1 Flavonoid ANS/LDOX medium borderline
FexcContig53120263830.1 Flavonoid ANS/LDOX medium borderline
FexcContig587280285750.1 Flavonoid ANS/LDOX medium borderline
FexcContig686340315810.1 Flavonoid ANS/LDOX low borderline
FexcContig73930328810.1 Flavonoid ANS/LDOX low borderline
FexcContig741480329570.1 Flavonoid ANS/LDOX medium borderline
FexcContig75130331490.1 Flavonoid ANS/LDOX medium borderline
FexcContig790341380.1 Flavonoid ANS/LDOX medium borderline
FexcContig790341380.2 Flavonoid ANS/LDOX low borderline
FexcContig152670051300.1 Flavonoid C4H medium borderline
FexcContig15510053400.1 Flavonoid C4H medium borderline
FexcContig1750068760.1 Flavonoid C4H medium borderline
FexcContig33740178140.1 Flavonoid C4H medium borderline
FexcContig37260197520.1 Flavonoid C4H low borderline
FexcContig411760216430.1 Flavonoid C4H low borderline
FexcContig464220237740.1 Flavonoid C4H medium pass
FexcContig50251500.1 Flavonoid C4H medium borderline
FexcContig59660289810.1 Flavonoid C4H medium borderline
FexcContig59660289810.2 Flavonoid C4H medium borderline
FexcContig59660289820.1 Flavonoid C4H medium borderline
FexcContig860900359110.1 Flavonoid C4H medium borderline
FexcContig101490003400.1 Flavonoid CHI medium pass
FexcContig10220004680.1 Flavonoid CHI low borderline
FexcContig132120033610.1 Flavonoid CHI medium pass
FexcContig17420068070.1 Flavonoid CHI medium pass
FexcContig2170101460.1 Flavonoid CHI medium pass
FexcContig2170101460.2 Flavonoid CHI medium pass
FexcContig220104030.1 Flavonoid CHI low borderline
FexcContig47020240220.1 Flavonoid CHI medium pass
FexcContig11210015530.1 Flavonoid CHS medium pass
FexcContig13470036070.1 Flavonoid CHS medium pass
FexcContig13470036070.2 Flavonoid CHS medium pass
FexcContig21900103520.1 Flavonoid CHS medium pass
FexcContig41240216780.1 Flavonoid CHS medium pass
FexcContig41240216780.2 Flavonoid CHS medium pass
FexcContig4240221920.1 Flavonoid CHS medium pass
FexcContig52930263200.1 Flavonoid CHS medium pass
FexcContig124450026770.1 Flavonoid DFR medium borderline
FexcContig124450026770.2 Flavonoid DFR medium borderline
FexcContig179870072420.1 Flavonoid DFR medium borderline
FexcContig19450084290.1 Flavonoid DFR medium borderline