PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
FexcContig28140146350.1 Alkaloid SLS medium borderline
FexcContig28140146360.1 Alkaloid SLS medium pass
FexcContig30970162870.1 Alkaloid SLS medium borderline
FexcContig30970162870.2 Alkaloid SLS medium borderline
FexcContig31720166970.1 Alkaloid SLS medium borderline
FexcContig341450180560.1 Alkaloid SLS low borderline
FexcContig35720189430.1 Alkaloid SLS medium borderline
FexcContig4200220890.1 Alkaloid SLS medium borderline
FexcContig50251480.1 Alkaloid SLS medium borderline
FexcContig50251480.2 Alkaloid SLS medium borderline
FexcContig50251490.2 Alkaloid SLS medium borderline
FexcContig50251500.1 Alkaloid SLS medium borderline
FexcContig5040253070.1 Alkaloid SLS medium borderline
FexcContig5040253070.2 Alkaloid SLS medium borderline
FexcContig58040283630.1 Alkaloid SLS medium borderline
FexcContig58880286290.1 Alkaloid SLS medium borderline
FexcContig58880286300.1 Alkaloid SLS medium borderline
FexcContig6550307670.1 Alkaloid SLS medium borderline
FexcContig71720323900.1 Alkaloid SLS medium borderline
FexcContig73910328770.1 Alkaloid SLS low borderline
FexcContig7600333740.1 Alkaloid SLS medium borderline
FexcContig7640334990.1 Alkaloid SLS medium borderline
FexcContig80080344210.1 Alkaloid SLS medium borderline
FexcContig85050356890.1 Alkaloid SLS medium borderline
FexcContig860900359110.1 Alkaloid SLS medium borderline
FexcContig870361260.1 Alkaloid SLS medium borderline
FexcContig910371200.1 Alkaloid SLS medium borderline
FexcContig9910387300.1 Alkaloid SLS medium pass
FexcContig9910387320.1 Alkaloid SLS medium borderline
FexcContig103370006290.1 Alkaloid STR medium pass
FexcContig11530018640.1 Alkaloid STR low borderline
FexcContig11530018640.2 Alkaloid STR low borderline
FexcContig11720020430.1 Alkaloid STR medium pass
FexcContig12040023270.1 Alkaloid STR low borderline
FexcContig12530027350.1 Alkaloid STR low borderline
FexcContig13350034870.1 Alkaloid STR medium pass
FexcContig13600037580.1 Alkaloid STR medium pass
FexcContig13600037580.2 Alkaloid STR medium pass
FexcContig140041220.1 Alkaloid STR low borderline
FexcContig1540052220.1 Alkaloid STR low borderline
FexcContig1540052220.2 Alkaloid STR low borderline
FexcContig1540052220.3 Alkaloid STR low borderline
FexcContig1540052260.1 Alkaloid STR low borderline
FexcContig1540052260.2 Alkaloid STR low borderline
FexcContig17330067520.1 Alkaloid STR low borderline
FexcContig18190074140.1 Alkaloid STR low borderline
FexcContig18300075180.1 Alkaloid STR low borderline
FexcContig18300075180.2 Alkaloid STR low borderline
FexcContig19720086390.1 Alkaloid STR low borderline
FexcContig19720086410.1 Alkaloid STR low borderline