PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
FexcContig3040160560.1 Alkaloid 7DLGT low borderline
FexcContig30460160780.1 Alkaloid 7DLGT low borderline
FexcContig3100163100.1 Alkaloid 7DLGT high pass
FexcContig31400165380.1 Alkaloid 7DLGT low borderline
FexcContig336010177560.1 Alkaloid 7DLGT high pass
FexcContig33890178940.1 Alkaloid 7DLGT low borderline
FexcContig33970179260.1 Alkaloid 7DLGT low borderline
FexcContig3440182280.1 Alkaloid 7DLGT low borderline
FexcContig346050183590.1 Alkaloid 7DLGT medium pass
FexcContig35360187580.1 Alkaloid 7DLGT low borderline
FexcContig35370187670.1 Alkaloid 7DLGT low borderline
FexcContig35800189810.1 Alkaloid 7DLGT low borderline
FexcContig36850195530.1 Alkaloid 7DLGT low borderline
FexcContig37590198880.1 Alkaloid 7DLGT low borderline
FexcContig37590198940.1 Alkaloid 7DLGT low borderline
FexcContig37930200520.1 Alkaloid 7DLGT low borderline
FexcContig37930200530.1 Alkaloid 7DLGT low borderline
FexcContig38030201130.1 Alkaloid 7DLGT medium pass
FexcContig38460203660.1 Alkaloid 7DLGT low borderline
FexcContig38560204010.1 Alkaloid 7DLGT low borderline
FexcContig40580213680.1 Alkaloid 7DLGT medium pass
FexcContig42830223560.1 Alkaloid 7DLGT medium pass
FexcContig42830223570.1 Alkaloid 7DLGT low borderline
FexcContig44330229340.1 Alkaloid 7DLGT low borderline
FexcContig44330229350.1 Alkaloid 7DLGT low borderline
FexcContig44490230010.1 Alkaloid 7DLGT low borderline
FexcContig4500232090.1 Alkaloid 7DLGT low borderline
FexcContig45650234880.1 Alkaloid 7DLGT low borderline
FexcContig45990236120.1 Alkaloid 7DLGT low borderline
FexcContig464820237930.1 Alkaloid 7DLGT medium pass
FexcContig48510245770.1 Alkaloid 7DLGT high pass
FexcContig48630246260.1 Alkaloid 7DLGT low borderline
FexcContig4900247710.1 Alkaloid 7DLGT low borderline
FexcContig490247480.1 Alkaloid 7DLGT high pass
FexcContig49700250260.1 Alkaloid 7DLGT low borderline
FexcContig4990251170.1 Alkaloid 7DLGT low borderline
FexcContig49940251280.1 Alkaloid 7DLGT medium pass
FexcContig5010251980.1 Alkaloid 7DLGT medium pass
FexcContig5010252120.1 Alkaloid 7DLGT low borderline
FexcContig5010252120.2 Alkaloid 7DLGT low borderline
FexcContig5010252130.1 Alkaloid 7DLGT low borderline
FexcContig5030252820.1 Alkaloid 7DLGT low borderline
FexcContig505670253640.1 Alkaloid 7DLGT low borderline
FexcContig512970255960.1 Alkaloid 7DLGT low borderline
FexcContig52360260710.1 Alkaloid 7DLGT low borderline
FexcContig53020263550.1 Alkaloid 7DLGT medium pass
FexcContig53340264330.1 Alkaloid 7DLGT medium pass
FexcContig53900266530.1 Alkaloid 7DLGT high pass
FexcContig54030267090.1 Alkaloid 7DLGT medium pass
FexcContig5410267260.1 Alkaloid 7DLGT low borderline