PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
FexcContig89550367940.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig8980368410.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig90690370700.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig91250371580.1 Steroid BR6OX2/CYP85A2 low borderline
FexcContig94020377180.1 Steroid BR6OX2/CYP85A2 medium borderline
FexcContig97750384320.2 Steroid BR6OX2/CYP85A2 low borderline
FexcContig00000420.1 Steroid CAS medium pass
FexcContig10270005230.1 Steroid CAS medium pass
FexcContig10570009880.1 Steroid CAS medium pass
FexcContig12420026590.1 Steroid CAS medium pass
FexcContig12440026670.1 Steroid CAS low borderline
FexcContig126910028410.1 Steroid CAS medium pass
FexcContig14470045200.1 Steroid CAS low borderline
FexcContig15110050300.1 Steroid CAS medium pass
FexcContig15110050300.2 Steroid CAS medium pass
FexcContig15110050300.3 Steroid CAS medium pass
FexcContig15110050300.4 Steroid CAS medium pass
FexcContig1800072610.1 Steroid CAS medium pass
FexcContig191100082050.1 Steroid CAS low borderline
FexcContig200088720.1 Steroid CAS low borderline
FexcContig21980103910.1 Steroid CAS medium pass
FexcContig23270112990.1 Steroid CAS medium pass
FexcContig23560115000.1 Steroid CAS medium pass
FexcContig235780115080.1 Steroid CAS medium pass
FexcContig23830116770.1 Steroid CAS medium pass
FexcContig25450128620.1 Steroid CAS low borderline
FexcContig26930137980.1 Steroid CAS medium pass
FexcContig2950155160.1 Steroid CAS low borderline
FexcContig30470160820.1 Steroid CAS medium pass
FexcContig30530161200.1 Steroid CAS low borderline
FexcContig31700166880.1 Steroid CAS medium pass
FexcContig3210169360.1 Steroid CAS medium pass
FexcContig32240170630.1 Steroid CAS low borderline
FexcContig32860174070.1 Steroid CAS medium pass
FexcContig3300174840.1 Steroid CAS low borderline
FexcContig3300174860.1 Steroid CAS medium pass
FexcContig33640177660.1 Steroid CAS medium pass
FexcContig33690177900.1 Steroid CAS medium pass
FexcContig37210197380.1 Steroid CAS medium pass
FexcContig37210197380.2 Steroid CAS medium pass
FexcContig39740209670.1 Steroid CAS medium pass
FexcContig39860210120.1 Steroid CAS medium pass
FexcContig39930210600.1 Steroid CAS medium pass
FexcContig40180211810.1 Steroid CAS medium pass
FexcContig4290223850.1 Steroid CAS medium pass
FexcContig4290223850.2 Steroid CAS medium pass
FexcContig4290223850.3 Steroid CAS medium pass
FexcContig4290223860.1 Steroid CAS medium pass
FexcContig43320225940.1 Steroid CAS medium pass
FexcContig44140228570.1 Steroid CAS low borderline