PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
FexcContig5050253540.1 Steroid CAS low borderline
FexcContig51830258120.1 Steroid CAS low borderline
FexcContig51830258120.2 Steroid CAS low borderline
FexcContig51830258120.3 Steroid CAS low borderline
FexcContig51830258120.4 Steroid CAS low borderline
FexcContig51840258140.1 Steroid CAS medium pass
FexcContig51840258140.2 Steroid CAS medium pass
FexcContig51840258140.3 Steroid CAS medium pass
FexcContig55470272980.1 Steroid CAS medium pass
FexcContig55470272980.2 Steroid CAS medium pass
FexcContig55470272980.3 Steroid CAS medium pass
FexcContig55470272980.4 Steroid CAS medium pass
FexcContig555800273570.1 Steroid CAS medium pass
FexcContig562600276300.1 Steroid CAS medium pass
FexcContig56800278570.1 Steroid CAS medium pass
FexcContig59210288110.1 Steroid CAS low borderline
FexcContig60750294310.1 Steroid CAS medium pass
FexcContig60750294330.1 Steroid CAS medium pass
FexcContig60780294380.1 Steroid CAS medium pass
FexcContig60780294380.2 Steroid CAS medium pass
FexcContig6270299560.1 Steroid CAS medium pass
FexcContig6730312100.1 Steroid CAS medium pass
FexcContig68610315800.1 Steroid CAS low borderline
FexcContig7120322680.1 Steroid CAS low borderline
FexcContig71610323570.1 Steroid CAS medium pass
FexcContig71610323570.2 Steroid CAS medium pass
FexcContig72560325990.1 Steroid CAS medium pass
FexcContig726200326180.1 Steroid CAS medium pass
FexcContig729970326890.1 Steroid CAS medium pass
FexcContig729970326890.2 Steroid CAS medium pass
FexcContig729970326890.3 Steroid CAS medium pass
FexcContig8030344640.1 Steroid CAS medium pass
FexcContig8030344640.2 Steroid CAS medium pass
FexcContig8030344640.3 Steroid CAS medium pass
FexcContig8030344650.1 Steroid CAS medium pass
FexcContig8030344650.2 Steroid CAS medium pass
FexcContig827520350960.1 Steroid CAS medium pass
FexcContig85970358630.1 Steroid CAS medium pass
FexcContig880363740.1 Steroid CAS medium pass
FexcContig880363740.2 Steroid CAS medium pass
FexcContig89720368210.1 Steroid CAS medium pass
FexcContig91360371670.1 Steroid CAS medium pass
FexcContig980384860.1 Steroid CAS medium pass
FexcContig98210385670.1 Steroid CAS low borderline
FexcContig100350001650.1 Steroid CPD/CYP90A1 low borderline
FexcContig104730008340.1 Steroid CPD/CYP90A1 medium borderline
FexcContig104730008340.2 Steroid CPD/CYP90A1 medium borderline
FexcContig14850047620.1 Steroid CPD/CYP90A1 medium borderline
FexcContig16260058870.1 Steroid CPD/CYP90A1 low borderline
FexcContig16300059290.1 Steroid CPD/CYP90A1 medium borderline