PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig50170252350.1 Alkaloid BBE medium borderline
FexcContig51000255090.1 Alkaloid BBE medium borderline
FexcContig53620265140.1 Alkaloid BBE medium borderline
FexcContig57460280940.1 Alkaloid BBE medium borderline
FexcContig6250298900.1 Alkaloid BBE medium borderline
FexcContig63100301060.1 Alkaloid BBE medium borderline
FexcContig650750306620.1 Alkaloid BBE medium borderline
FexcContig65860308420.1 Alkaloid BBE medium borderline
FexcContig68110314290.1 Alkaloid BBE medium borderline
FexcContig68950316680.1 Alkaloid BBE medium borderline
FexcContig68950316690.1 Alkaloid BBE medium borderline
FexcContig71780323980.1 Alkaloid BBE medium borderline
FexcContig7400329190.1 Alkaloid BBE medium borderline
FexcContig7400329200.1 Alkaloid BBE medium borderline
FexcContig7400329210.1 Alkaloid BBE medium borderline
FexcContig81160347180.1 Alkaloid BBE medium borderline
FexcContig849520356150.1 Alkaloid BBE medium borderline
FexcContig90368940.1 Alkaloid BBE medium borderline
FexcContig90368950.1 Alkaloid BBE medium borderline
FexcContig90368960.1 Alkaloid BBE low borderline
FexcContig10730011170.1 Alkaloid CNMT low borderline
FexcContig19350083840.1 Alkaloid CNMT low borderline
FexcContig19350083840.2 Alkaloid CNMT low borderline
FexcContig19350083840.3 Alkaloid CNMT low borderline
FexcContig19350083840.4 Alkaloid CNMT low borderline
FexcContig20460092940.1 Alkaloid CNMT medium borderline
FexcContig20460092940.2 Alkaloid CNMT medium borderline
FexcContig21160097670.1 Alkaloid CNMT low borderline
FexcContig28140146430.1 Alkaloid CNMT low borderline
FexcContig29730156520.1 Alkaloid CNMT low borderline
FexcContig520258740.1 Alkaloid CNMT low borderline
FexcContig520258740.2 Alkaloid CNMT low borderline
FexcContig6120295970.1 Alkaloid CNMT low borderline
FexcContig6120295970.2 Alkaloid CNMT low borderline
FexcContig6120295970.3 Alkaloid CNMT low borderline
FexcContig6760312880.1 Alkaloid CNMT low borderline
FexcContig8500356780.1 Alkaloid CNMT low borderline
FexcContig8500356780.2 Alkaloid CNMT low borderline
FexcContig9490378700.1 Alkaloid CNMT low borderline
FexcContig1100013240.1 Alkaloid CODM/T6ODM medium borderline
FexcContig1100013360.1 Alkaloid CODM/T6ODM medium borderline
FexcContig1100013360.2 Alkaloid CODM/T6ODM medium borderline
FexcContig11310016590.1 Alkaloid CODM/T6ODM medium borderline
FexcContig11310016600.1 Alkaloid CODM/T6ODM medium borderline
FexcContig1150018220.1 Alkaloid CODM/T6ODM medium borderline
FexcContig1150018220.2 Alkaloid CODM/T6ODM medium borderline
FexcContig1150018220.3 Alkaloid CODM/T6ODM medium borderline
FexcContig1150018220.4 Alkaloid CODM/T6ODM medium borderline
FexcContig11530018720.1 Alkaloid CODM/T6ODM medium borderline
FexcContig11790021010.1 Alkaloid CODM/T6ODM medium borderline