PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig8210349440.1 Alkaloid 7DLH medium borderline
FexcContig82360350120.1 Alkaloid 7DLH medium borderline
FexcContig881370364250.1 Alkaloid 7DLH medium borderline
FexcContig9480378410.1 Alkaloid 7DLH medium borderline
FexcContig9910387310.1 Alkaloid 7DLH medium borderline
FexcContig105230009280.1 Alkaloid 8HGO medium pass
FexcContig11140014810.1 Alkaloid 8HGO medium borderline
FexcContig11730020470.1 Alkaloid 8HGO medium borderline
FexcContig14380044390.1 Alkaloid 8HGO medium borderline
FexcContig21810102860.1 Alkaloid 8HGO low borderline
FexcContig21890103350.1 Alkaloid 8HGO medium borderline
FexcContig24380120500.1 Alkaloid 8HGO low borderline
FexcContig25050125420.1 Alkaloid 8HGO medium borderline
FexcContig29110152940.1 Alkaloid 8HGO medium borderline
FexcContig29300154150.1 Alkaloid 8HGO medium borderline
FexcContig30850162470.1 Alkaloid 8HGO medium pass
FexcContig40200212030.1 Alkaloid 8HGO medium borderline
FexcContig6470305450.1 Alkaloid 8HGO medium borderline
FexcContig8370353150.1 Alkaloid 8HGO medium borderline
FexcContig8370353160.1 Alkaloid 8HGO medium borderline
FexcContig89020366700.1 Alkaloid 8HGO medium pass
FexcContig89020366700.2 Alkaloid 8HGO medium borderline
FexcContig92970375170.1 Alkaloid 8HGO medium borderline
FexcContig92970375170.2 Alkaloid 8HGO medium pass
FexcContig00000290.1 Alkaloid ADC medium pass
FexcContig00000300.1 Alkaloid ADC medium pass
FexcContig15660054480.1 Alkaloid ADC medium pass
FexcContig31440165600.1 Alkaloid ADC medium pass
FexcContig37680199440.1 Alkaloid ADC medium pass
FexcContig10260005120.1 Alkaloid BBE low borderline
FexcContig14920048530.1 Alkaloid BBE medium borderline
FexcContig153890051940.1 Alkaloid BBE medium borderline
FexcContig16250058850.1 Alkaloid BBE medium borderline
FexcContig16250058860.1 Alkaloid BBE medium borderline
FexcContig18100073540.1 Alkaloid BBE medium borderline
FexcContig18100073560.1 Alkaloid BBE medium borderline
FexcContig198660087330.1 Alkaloid BBE medium borderline
FexcContig19940087890.1 Alkaloid BBE medium borderline
FexcContig27070139150.1 Alkaloid BBE medium borderline
FexcContig28180146650.1 Alkaloid BBE medium borderline
FexcContig28180146660.1 Alkaloid BBE medium borderline
FexcContig30157890.1 Alkaloid BBE medium borderline
FexcContig31370165210.1 Alkaloid BBE medium borderline
FexcContig34070180110.1 Alkaloid BBE medium borderline
FexcContig34070180120.1 Alkaloid BBE medium borderline
FexcContig37880200080.1 Alkaloid BBE medium borderline
FexcContig40090211400.1 Alkaloid BBE medium borderline
FexcContig40350212700.1 Alkaloid BBE medium borderline
FexcContig42210221570.1 Alkaloid BBE medium borderline
FexcContig45230233380.1 Alkaloid BBE medium borderline