PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
FexcContig9910387320.1 Flavonoid F3'H/CYP75B low borderline
FexcContig10000490.1 Flavonoid F3H medium borderline
FexcContig1100013240.1 Flavonoid F3H medium borderline
FexcContig1100013360.1 Flavonoid F3H medium borderline
FexcContig1100013360.2 Flavonoid F3H medium borderline
FexcContig11310016590.1 Flavonoid F3H medium borderline
FexcContig11310016600.1 Flavonoid F3H medium borderline
FexcContig1150018220.1 Flavonoid F3H low borderline
FexcContig1150018220.2 Flavonoid F3H low borderline
FexcContig1150018220.3 Flavonoid F3H low borderline
FexcContig1150018220.4 Flavonoid F3H low borderline
FexcContig11790021010.1 Flavonoid F3H medium pass
FexcContig13100032400.1 Flavonoid F3H medium borderline
FexcContig1330034340.1 Flavonoid F3H medium borderline
FexcContig1330034440.1 Flavonoid F3H medium borderline
FexcContig14290043620.1 Flavonoid F3H medium borderline
FexcContig1490048120.1 Flavonoid F3H medium borderline
FexcContig15150050520.1 Flavonoid F3H medium borderline
FexcContig15170050770.1 Flavonoid F3H medium borderline
FexcContig15170050770.2 Flavonoid F3H medium borderline
FexcContig15200050960.1 Flavonoid F3H medium borderline
FexcContig1540052240.1 Flavonoid F3H medium pass
FexcContig15550053670.1 Flavonoid F3H medium borderline
FexcContig18730078560.1 Flavonoid F3H low borderline
FexcContig19060081600.1 Flavonoid F3H medium borderline
FexcContig19560085100.1 Flavonoid F3H low borderline
FexcContig19560085100.2 Flavonoid F3H low borderline
FexcContig2020090700.1 Flavonoid F3H medium borderline
FexcContig2020090700.2 Flavonoid F3H medium borderline
FexcContig21100097360.1 Flavonoid F3H medium borderline
FexcContig21100097360.2 Flavonoid F3H medium borderline
FexcContig21570100630.1 Flavonoid F3H low borderline
FexcContig21650101160.1 Flavonoid F3H medium borderline
FexcContig21650101180.1 Flavonoid F3H medium borderline
FexcContig21690101250.1 Flavonoid F3H low borderline
FexcContig21970103850.1 Flavonoid F3H medium borderline
FexcContig21970103860.1 Flavonoid F3H medium borderline
FexcContig22600108090.1 Flavonoid F3H medium borderline
FexcContig22720108850.1 Flavonoid F3H medium borderline
FexcContig22910110000.1 Flavonoid F3H medium borderline
FexcContig22910110000.2 Flavonoid F3H medium borderline
FexcContig23660115660.1 Flavonoid F3H medium borderline
FexcContig24200119350.1 Flavonoid F3H medium borderline
FexcContig25650130080.1 Flavonoid F3H medium borderline
FexcContig25650130090.1 Flavonoid F3H medium borderline
FexcContig25820131630.1 Flavonoid F3H medium borderline
FexcContig26140133680.1 Flavonoid F3H medium borderline
FexcContig2710139250.1 Flavonoid F3H medium borderline
FexcContig271100139340.1 Flavonoid F3H medium borderline
FexcContig27650142680.1 Flavonoid F3H medium pass