PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2990
Candidate Protein Records
2479
Pathway-Level Records
5917
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
FexcContig278970144360.1 Flavonoid F3H medium borderline
FexcContig280145030.1 Flavonoid F3H low borderline
FexcContig28020145370.1 Flavonoid F3H low borderline
FexcContig28020145370.2 Flavonoid F3H low borderline
FexcContig28020145370.3 Flavonoid F3H low borderline
FexcContig28800150630.1 Flavonoid F3H medium pass
FexcContig2900152170.1 Flavonoid F3H low borderline
FexcContig29150153180.1 Flavonoid F3H medium borderline
FexcContig29150153180.2 Flavonoid F3H medium borderline
FexcContig29150153180.3 Flavonoid F3H medium borderline
FexcContig30100159140.1 Flavonoid F3H medium borderline
FexcContig302020159540.1 Flavonoid F3H medium borderline
FexcContig31440165580.1 Flavonoid F3H medium borderline
FexcContig3180167400.1 Flavonoid F3H medium borderline
FexcContig31820167590.1 Flavonoid F3H medium borderline
FexcContig3190168080.1 Flavonoid F3H medium borderline
FexcContig3190168080.2 Flavonoid F3H medium borderline
FexcContig3210169540.1 Flavonoid F3H medium borderline
FexcContig3210169540.2 Flavonoid F3H medium borderline
FexcContig3210169540.3 Flavonoid F3H medium borderline
FexcContig32540172360.1 Flavonoid F3H medium borderline
FexcContig32670172830.1 Flavonoid F3H medium borderline
FexcContig32890174290.1 Flavonoid F3H medium borderline
FexcContig33400176650.1 Flavonoid F3H low borderline
FexcContig35200186480.1 Flavonoid F3H medium borderline
FexcContig35200186480.2 Flavonoid F3H medium borderline
FexcContig35390187710.1 Flavonoid F3H medium borderline
FexcContig35390187710.2 Flavonoid F3H medium borderline
FexcContig356820189230.1 Flavonoid F3H medium borderline
FexcContig35950190280.1 Flavonoid F3H low borderline
FexcContig38540203960.1 Flavonoid F3H low borderline
FexcContig38770205000.1 Flavonoid F3H medium borderline
FexcContig38770205000.2 Flavonoid F3H medium borderline
FexcContig39310207740.1 Flavonoid F3H low borderline
FexcContig39370207910.1 Flavonoid F3H medium borderline
FexcContig3970209460.1 Flavonoid F3H medium borderline
FexcContig3970209470.1 Flavonoid F3H medium borderline
FexcContig3970209470.2 Flavonoid F3H medium borderline
FexcContig40360212730.1 Flavonoid F3H medium borderline
FexcContig40360212730.2 Flavonoid F3H medium borderline
FexcContig40730214150.1 Flavonoid F3H medium borderline
FexcContig41060215720.1 Flavonoid F3H low borderline
FexcContig41060215730.1 Flavonoid F3H low borderline
FexcContig41060215730.2 Flavonoid F3H low borderline
FexcContig4200220810.1 Flavonoid F3H medium borderline
FexcContig42680223090.1 Flavonoid F3H medium borderline
FexcContig43270225740.1 Flavonoid F3H medium borderline
FexcContig44790231160.1 Flavonoid F3H medium borderline
FexcContig44790231160.2 Flavonoid F3H medium borderline
FexcContig4530233650.1 Flavonoid F3H medium borderline