PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
FexcContig8740362180.1 Rosmarinic Acid C4H low borderline
FexcContig8790363410.1 Rosmarinic Acid C4H low borderline
FexcContig8790363410.2 Rosmarinic Acid C4H low borderline
FexcContig881370364250.1 Rosmarinic Acid C4H low borderline
FexcContig886780365530.1 Rosmarinic Acid C4H medium pass
FexcContig88700365680.1 Rosmarinic Acid C4H low borderline
FexcContig8940367440.1 Rosmarinic Acid C4H low borderline
FexcContig8940367630.1 Rosmarinic Acid C4H medium pass
FexcContig89550367940.1 Rosmarinic Acid C4H low borderline
FexcContig8980368410.1 Rosmarinic Acid C4H low borderline
FexcContig90690370690.1 Rosmarinic Acid C4H low borderline
FexcContig90690370700.1 Rosmarinic Acid C4H medium pass
FexcContig90870371040.1 Rosmarinic Acid C4H low borderline
FexcContig910371200.1 Rosmarinic Acid C4H low borderline
FexcContig91250371580.1 Rosmarinic Acid C4H low borderline
FexcContig91330371650.1 Rosmarinic Acid C4H low borderline
FexcContig92120373660.1 Rosmarinic Acid C4H low borderline
FexcContig92120373660.2 Rosmarinic Acid C4H low borderline
FexcContig92480374380.1 Rosmarinic Acid C4H low borderline
FexcContig92830374940.1 Rosmarinic Acid C4H low borderline
FexcContig9480378410.1 Rosmarinic Acid C4H low borderline
FexcContig95590380310.1 Rosmarinic Acid C4H low borderline
FexcContig97270383590.1 Rosmarinic Acid C4H low borderline
FexcContig97750384320.2 Rosmarinic Acid C4H low borderline
FexcContig9800385220.1 Rosmarinic Acid C4H low borderline
FexcContig9910387310.1 Rosmarinic Acid C4H low borderline
FexcContig100730002340.1 Rosmarinic Acid CPR medium pass
FexcContig1060009990.1 Rosmarinic Acid CPR medium pass
FexcContig1190021750.1 Rosmarinic Acid CPR medium pass
FexcContig1190021760.1 Rosmarinic Acid CPR medium pass
FexcContig1190021760.2 Rosmarinic Acid CPR medium pass
FexcContig1190021760.3 Rosmarinic Acid CPR medium pass
FexcContig12810029720.1 Rosmarinic Acid CPR medium pass
FexcContig14470045270.1 Rosmarinic Acid CPR medium pass
FexcContig15390052040.1 Rosmarinic Acid CPR medium pass
FexcContig19150082390.1 Rosmarinic Acid CPR medium pass
FexcContig200088830.1 Rosmarinic Acid CPR medium pass
FexcContig34190180810.1 Rosmarinic Acid CPR medium pass
FexcContig34190180810.2 Rosmarinic Acid CPR medium pass
FexcContig34190180810.3 Rosmarinic Acid CPR medium pass
FexcContig386460204510.1 Rosmarinic Acid CPR medium pass
FexcContig3870204640.1 Rosmarinic Acid CPR medium pass
FexcContig39020206370.1 Rosmarinic Acid CPR medium pass
FexcContig43310225890.1 Rosmarinic Acid CPR low borderline
FexcContig52140259780.1 Rosmarinic Acid CPR medium pass
FexcContig52140259780.2 Rosmarinic Acid CPR medium pass
FexcContig770336460.1 Rosmarinic Acid CPR medium pass
FexcContig87070361470.1 Rosmarinic Acid CPR medium pass
FexcContig16980064430.1 Rosmarinic Acid HPPR medium pass
FexcContig27060139110.1 Rosmarinic Acid HPPR medium pass