PlantSME Plant secondary metabolism enzyme database

Fraxinus excelsior (fraxinus_excelsior)

Imported from atlas release summary for Fraxinus excelsior.

2479
Family-Level Assignments
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 749 20 BAHD (302) View species results
Alkaloid pathway 573 21 7DLGT (101) View species results
Phenylpropanoid pathway 470 12 POD (198) View species results
Flavonoid pathway 280 10 UFGT (183) View species results
Rosmarinic acid pathway 206 7 C4H (90) View species results
Steroid pathway 201 12 SMT1/SMT2/SMT3 (78) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 2115 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 472 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status
FexcContig700980319680.1 Rosmarinic Acid C4H low borderline
FexcContig70318890.1 Rosmarinic Acid C4H medium pass
FexcContig70318960.1 Rosmarinic Acid C4H low borderline
FexcContig70318960.2 Rosmarinic Acid C4H low borderline
FexcContig7100322190.1 Rosmarinic Acid C4H low borderline
FexcContig71610323640.1 Rosmarinic Acid C4H low borderline
FexcContig71940324390.1 Rosmarinic Acid C4H medium pass
FexcContig7200324730.1 Rosmarinic Acid C4H medium pass
FexcContig72030324800.1 Rosmarinic Acid C4H low borderline
FexcContig72800326610.1 Rosmarinic Acid C4H low borderline
FexcContig73470327910.1 Rosmarinic Acid C4H low borderline
FexcContig740328950.1 Rosmarinic Acid C4H medium pass
FexcContig740328960.1 Rosmarinic Acid C4H medium pass
FexcContig740328970.1 Rosmarinic Acid C4H medium pass
FexcContig740329040.1 Rosmarinic Acid C4H low borderline
FexcContig7560332530.1 Rosmarinic Acid C4H medium pass
FexcContig7600333740.1 Rosmarinic Acid C4H low borderline
FexcContig76020333930.1 Rosmarinic Acid C4H low borderline
FexcContig760333540.1 Rosmarinic Acid C4H medium pass
FexcContig760333540.2 Rosmarinic Acid C4H medium pass
FexcContig76130334110.1 Rosmarinic Acid C4H low borderline
FexcContig7640334990.1 Rosmarinic Acid C4H low borderline
FexcContig76630335570.1 Rosmarinic Acid C4H medium pass
FexcContig772160337500.1 Rosmarinic Acid C4H low borderline
FexcContig779300339090.1 Rosmarinic Acid C4H low borderline
FexcContig783900339920.1 Rosmarinic Acid C4H medium pass
FexcContig7850340160.1 Rosmarinic Acid C4H low borderline
FexcContig7860340390.1 Rosmarinic Acid C4H low borderline
FexcContig7880340820.1 Rosmarinic Acid C4H low borderline
FexcContig7940342020.1 Rosmarinic Acid C4H low borderline
FexcContig7940342030.1 Rosmarinic Acid C4H medium pass
FexcContig80080344200.1 Rosmarinic Acid C4H low borderline
FexcContig808150345980.1 Rosmarinic Acid C4H low borderline
FexcContig811840347240.1 Rosmarinic Acid C4H low borderline
FexcContig818240348430.1 Rosmarinic Acid C4H low borderline
FexcContig818240348440.1 Rosmarinic Acid C4H low borderline
FexcContig8210349440.1 Rosmarinic Acid C4H low borderline
FexcContig82360350120.1 Rosmarinic Acid C4H low borderline
FexcContig8250350430.1 Rosmarinic Acid C4H low borderline
FexcContig830570351810.1 Rosmarinic Acid C4H low borderline
FexcContig83210352100.1 Rosmarinic Acid C4H low borderline
FexcContig83330352430.1 Rosmarinic Acid C4H low borderline
FexcContig8340352630.1 Rosmarinic Acid C4H low borderline
FexcContig83960353740.1 Rosmarinic Acid C4H low borderline
FexcContig85050356890.1 Rosmarinic Acid C4H low borderline
FexcContig85340357450.1 Rosmarinic Acid C4H medium pass
FexcContig8540357590.1 Rosmarinic Acid C4H medium pass
FexcContig860900359110.1 Rosmarinic Acid C4H low borderline
FexcContig86680360620.1 Rosmarinic Acid C4H low borderline
FexcContig870361260.1 Rosmarinic Acid C4H low borderline