PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

6129
Candidate Protein Records
5262
Pathway-Level Records
12692
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
6A_all_VO_L_40862_T_24/27|m.54451.mrna1 Flavonoid IFS medium borderline
PITA_000000196-RA Flavonoid IFS low borderline
PITA_000000685-RA Flavonoid IFS medium borderline
PITA_000002570-RA Flavonoid IFS medium borderline
PITA_000002642-RA Flavonoid IFS low borderline
PITA_000002885-RA Flavonoid IFS medium borderline
PITA_000002918-RA Flavonoid IFS low borderline
PITA_000002925-RA Flavonoid IFS low borderline
PITA_000003917-RA Flavonoid IFS low borderline
PITA_000004257-RA Flavonoid IFS medium borderline
PITA_000004869-RA Flavonoid IFS medium borderline
PITA_000004870-RA Flavonoid IFS medium borderline
PITA_000004872-RA Flavonoid IFS medium borderline
PITA_000005076-RA Flavonoid IFS low borderline
PITA_000006071-RA Flavonoid IFS medium borderline
PITA_000006813-RA Flavonoid IFS low borderline
PITA_000006872-RA Flavonoid IFS low borderline
PITA_000006873-RA Flavonoid IFS low borderline
PITA_000006874-RA Flavonoid IFS low borderline
PITA_000007064-RA Flavonoid IFS low borderline
PITA_000007203-RA Flavonoid IFS low borderline
PITA_000007688-RA Flavonoid IFS low borderline
PITA_000007980-RA Flavonoid IFS medium borderline
PITA_000008620-RA Flavonoid IFS medium borderline
PITA_000008681-RA Flavonoid IFS medium borderline
PITA_000009191-RA Flavonoid IFS medium borderline
PITA_000010136-RA Flavonoid IFS medium borderline
PITA_000010264-RA Flavonoid IFS medium borderline
PITA_000010409-RA Flavonoid IFS medium borderline
PITA_000010799-RA Flavonoid IFS low borderline
PITA_000010839-RA Flavonoid IFS medium borderline
PITA_000010840-RA Flavonoid IFS medium borderline
PITA_000011056-RA Flavonoid IFS low borderline
PITA_000011084-RA Flavonoid IFS low borderline
PITA_000011482-RA Flavonoid IFS medium borderline
PITA_000011912-RA Flavonoid IFS low borderline
PITA_000011915-RA Flavonoid IFS low borderline
PITA_000012639-RA Flavonoid IFS medium borderline
PITA_000014937-RA Flavonoid IFS medium borderline
PITA_000015103-RA Flavonoid IFS low borderline
PITA_000015650-RA Flavonoid IFS medium borderline
PITA_000015787-RA Flavonoid IFS low borderline
PITA_000015915-RA Flavonoid IFS low borderline
PITA_000015916-RA Flavonoid IFS low borderline
PITA_000016127-RA Flavonoid IFS medium borderline
PITA_000017562-RA Flavonoid IFS low borderline
PITA_000019446-RA Flavonoid IFS medium borderline
PITA_000020060-RA Flavonoid IFS low borderline
PITA_000020566-RA Flavonoid IFS low borderline
PITA_000020567-RA Flavonoid IFS low borderline