PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX1/CYP85A1
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Gene Pathway Family Confidence Status
PITA_000000634-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000002918-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000002925-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000005097-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000020177-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000022144-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000022846-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000025906-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000026727-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000030169-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000030717-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000032079-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000034815-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000035717-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000035744-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000039601-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000040347-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000044249-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000044373-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000046584-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000050806-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000057153-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000057179-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000058451-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000058988-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000060286-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000062408-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000063779-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000065025-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000068412-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000070750-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000070945-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000073007-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000073980-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000076418-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000077664-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000080970-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000081468-RA Steroid BR6OX1/CYP85A1 medium borderline
PITA_000094809-RA Steroid BR6OX1/CYP85A1 low borderline
PITA_000095302-RA Steroid BR6OX1/CYP85A1 medium borderline
PITAhm_001313-RA Steroid BR6OX1/CYP85A1 low borderline