PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
1A_all_VO_L_799_T_709/713|m.1521.mrna1 Steroid BR6OX2/CYP85A2 low borderline
2A_I15_VO_L_3412_T_2/3|m.22314.mrna1 Steroid BR6OX2/CYP85A2 low borderline
2A_all_VO_L_20057_T_11/12|m.16808.mrna1 Steroid BR6OX2/CYP85A2 low borderline
3A_all_VO_L_45670_T_3/7|m.29968.mrna1 Steroid BR6OX2/CYP85A2 low borderline
3A_all_VO_L_45670_T_3/7|m.29968.mrna2 Steroid BR6OX2/CYP85A2 low borderline
5A_I15_VO_L_2583_T_52/67|m.47001.mrna1 Steroid BR6OX2/CYP85A2 low borderline
5A_all_NT_comp98714_c0_seq3|m.38113.mrna1 Steroid BR6OX2/CYP85A2 low borderline
6A_I20_VO_L_989_T_15/28|m.55970.mrna1 Steroid BR6OX2/CYP85A2 low borderline
6A_all_VO_L_40862_T_24/27|m.54451.mrna1 Steroid BR6OX2/CYP85A2 low borderline
PITA_000000241-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000000303-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000000685-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000000899-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000004257-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000004869-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000004870-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000005076-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000007289-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000007688-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000007978-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000008353-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000008620-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000008622-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000008681-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000010136-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000010363-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000010839-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000010840-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000012074-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000012112-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000012639-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000013490-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000015102-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000015506-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000015650-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000015915-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000015916-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000018199-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000019040-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000019042-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000019446-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000020566-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000020567-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000020568-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000021538-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000021926-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000022231-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000023275-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000024284-RA Steroid BR6OX2/CYP85A2 low borderline
PITA_000024813-RA Steroid BR6OX2/CYP85A2 low borderline