PlantSME Plant secondary metabolism enzyme database

Pinus taeda (pinus_taeda)

Imported from atlas release summary for Pinus taeda.

5262
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1469 18 UGT (484) View species results
Phenylpropanoid pathway 1259 13 POD (460) View species results
Alkaloid pathway 1046 30 7DLGT (246) View species results
Flavonoid pathway 799 16 UFGT (341) View species results
Rosmarinic acid pathway 408 7 4CL (161) View species results
Steroid pathway 281 16 CAS (195) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4571 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 737 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status
PITA_000000106-RA Alkaloid LAMT medium pass
PITA_000007106-RA Alkaloid LAMT low borderline
PITA_000009013-RA Alkaloid LAMT low borderline
PITA_000011023-RA Alkaloid LAMT medium borderline
PITA_000012579-RA Alkaloid LAMT low borderline
PITA_000015205-RA Alkaloid LAMT low borderline
PITA_000015208-RA Alkaloid LAMT medium borderline
PITA_000020833-RA Alkaloid LAMT medium borderline
PITA_000021710-RA Alkaloid LAMT low borderline
PITA_000023305-RA Alkaloid LAMT medium borderline
PITA_000029640-RA Alkaloid LAMT low borderline
PITA_000031500-RA Alkaloid LAMT low borderline
PITA_000033391-RA Alkaloid LAMT low borderline
PITA_000035357-RA Alkaloid LAMT low borderline
PITA_000038179-RA Alkaloid LAMT medium borderline
PITA_000040527-RA Alkaloid LAMT medium borderline
PITA_000042603-RA Alkaloid LAMT low borderline
PITA_000042760-RA Alkaloid LAMT medium borderline
PITA_000045531-RA Alkaloid LAMT medium borderline
PITA_000046252-RA Alkaloid LAMT medium borderline
PITA_000046253-RA Alkaloid LAMT medium borderline
PITA_000046724-RA Alkaloid LAMT medium borderline
PITA_000047551-RA Alkaloid LAMT medium borderline
PITA_000047687-RA Alkaloid LAMT low borderline
PITA_000049229-RA Alkaloid LAMT low borderline
PITA_000050623-RA Alkaloid LAMT medium borderline
PITA_000050633-RA Alkaloid LAMT low borderline
PITA_000051308-RA Alkaloid LAMT medium borderline
PITA_000053366-RA Alkaloid LAMT low borderline
PITA_000053699-RA Alkaloid LAMT low borderline
PITA_000056301-RA Alkaloid LAMT low borderline
PITA_000056669-RA Alkaloid LAMT medium borderline
PITA_000058868-RA Alkaloid LAMT medium borderline
PITA_000060862-RA Alkaloid LAMT medium borderline
PITA_000061774-RA Alkaloid LAMT medium borderline
PITA_000064261-RA Alkaloid LAMT medium borderline
PITA_000064866-RA Alkaloid LAMT low borderline
PITA_000065434-RA Alkaloid LAMT medium borderline
PITA_000066422-RA Alkaloid LAMT low borderline
PITA_000066625-RA Alkaloid LAMT medium borderline
PITA_000067984-RA Alkaloid LAMT low borderline
PITA_000068473-RA Alkaloid LAMT medium borderline
PITA_000071315-RA Alkaloid LAMT low borderline
PITA_000071982-RA Alkaloid LAMT low borderline
PITA_000072998-RA Alkaloid LAMT medium borderline
PITA_000074154-RA Alkaloid LAMT medium borderline
PITA_000079775-RA Alkaloid LAMT medium borderline
PITA_000079880-RA Alkaloid LAMT low borderline
PITA_000080165-RA Alkaloid LAMT low borderline
PITA_000085027-RA Alkaloid LAMT medium borderline